RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 TRIM59Q8IWR1 403 aa8.03□□□□□ -1.12
CPNE4-202ENST00000502818 TMEM161BQ8NDZ6 487 aa8.03□□□□□ -1.12
CPNE4-202ENST00000502818 AFG1LQ8WV93 481 aa8.03□□□□□ -1.12
CPNE4-202ENST00000502818 BORCS6Q96GS4 357 aa8.03□□□□□ -1.12
CPNE4-202ENST00000502818 TINF2Q9BSI4 451 aa8.03□□□□□ -1.12
CPNE4-202ENST00000502818 TYW1Q9NV66 732 aaKnown RBP8.03□□□□□ -1.12
CPNE4-202ENST00000502818 GJD2Q9UKL4 321 aa8.03□□□□□ -1.12
CPNE4-202ENST00000502818 SIK3Q9Y2K2 1263 aa8.03□□□□□ -1.12
CPNE4-202ENST00000502818 DIS3Q9Y2L1 958 aaKnown RBP8.03□□□□□ -1.12
CPNE4-202ENST00000502818 PCDHB13Q9Y5F0 798 aa8.03□□□□□ -1.12
CPNE4-202ENST00000502818 HTTP42858 3142 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 SOWAHDA6NJG2 315 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 TMEM88BA6NKF7 163 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 RIOK3O14730 519 aaKnown RBP8.02□□□□□ -1.13
CPNE4-202ENST00000502818 EIF3DO15371 548 aaKnown RBP eCLIP8.02□□□□□ -1.13
CPNE4-202ENST00000502818 STRNO43815 780 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 MFAP3LO75121 409 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 LRRN2O75325 713 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 LGR5O75473 907 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 GLRA2P23416 452 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 ADSSP30520 456 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 MAPK4P31152 587 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 NCKAP1LP55160 1127 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 GSDMDP57764 484 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 TTLL4Q14679 1199 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 EDRF1Q3B7T1 1238 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 TOGARAM2Q6ZUX3 1019 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 ZNF771Q7L3S4 317 aaPredicted RBP8.02□□□□□ -1.13
CPNE4-202ENST00000502818 OTUD6AQ7L8S5 288 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 ABRAQ8N0Z2 381 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 LRRC71Q8N4P6 559 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 SMC1BQ8NDV3 1235 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 PLEKHO2Q8TD55 490 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 AFAP1L1Q8TED9 768 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 USP6NLQ92738 828 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 GLG1Q92896 1179 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 NIFKQ9BYG3 293 aaKnown RBP8.02□□□□□ -1.13
CPNE4-202ENST00000502818 TTYH3Q9C0H2 523 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 DHX33Q9H6R0 707 aaKnown RBP8.02□□□□□ -1.13
CPNE4-202ENST00000502818 SEL1LQ9UBV2 794 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 PLXNA1Q9UIW2 1896 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 BRCA2P51587 3418 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 RBM47A0AV96 593 aaKnown RBP8.02□□□□□ -1.13
CPNE4-202ENST00000502818 GOLGA8IPA6NC78 632 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 SLC15A5A6NIM6 579 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 GOLGA8JA6NMD2 632 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 AKR1B15C9JRZ8 316 aaPredicted RBP8.02□□□□□ -1.13
CPNE4-202ENST00000502818 NOP56O00567 594 aaKnown RBP8.02□□□□□ -1.13
CPNE4-202ENST00000502818 ACTN1P12814 892 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 DLG4P78352 724 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 GTF2BQ00403 316 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 MAP2K5Q13163 448 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 ACVR2BQ13705 512 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 MAN2A1Q16706 1144 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 DPY19L2P1Q6NXN4 242 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 RAD9BQ6WBX8 426 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 CCDC150Q8NCX0 1101 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 SCFD2Q8WU76 684 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 ELMO3Q96BJ8 720 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 CEP63Q96MT8 703 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 CHP1Q99653 195 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 DESI2Q9BSY9 194 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 ATP6V0A4Q9HBG4 840 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 FAM207AQ9NSI2 230 aaPredicted RBP8.02□□□□□ -1.13
CPNE4-202ENST00000502818 DMAC2Q9NW81 257 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 LARSQ9P2J5 1176 aaKnown RBP8.02□□□□□ -1.13
CPNE4-202ENST00000502818 GABRQQ9UN88 632 aa8.02□□□□□ -1.13
CPNE4-202ENST00000502818 MYH11P35749 1972 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 DENND3A2RUS2 1198 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 CETN3O15182 167 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 CALUO43852 315 aaPredicted RBP8.01□□□□□ -1.13
CPNE4-202ENST00000502818 DGAT1O75907 488 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 NOL4O94818 638 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 TBC1D8O95759 1140 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 LGALS2P05162 132 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 TRIM49P0CI25 452 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 TRIM49CP0CI26 452 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 MAPTP10636 758 aaKnown RBP8.01□□□□□ -1.13
CPNE4-202ENST00000502818 ARL2P36404 184 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 TM4SF4P48230 202 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 DNM2P50570 870 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 POLGP54098 1239 aaPredicted RBP8.01□□□□□ -1.13
CPNE4-202ENST00000502818 IGBP1P78318 339 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 TRIM32Q13049 653 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 OLFML2BQ68BL8 750 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 FAM114A1Q8IWE2 563 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 SYCP3Q8IZU3 236 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 ANKRD20A12PQ8NF67 263 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 SAAL1Q96ER3 474 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 DRC1Q96MC2 740 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 PPP1R16BQ96T49 567 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 IRX2Q9BZI1 471 aaPredicted RBP8.01□□□□□ -1.13
CPNE4-202ENST00000502818 HAPLN2Q9GZV7 340 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 GBP3Q9H0R5 595 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 SUGCTQ9HAC7 445 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 VTA1Q9NP79 307 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 KMT5AQ9NQR1 393 aa8.01□□□□□ -1.13
CPNE4-202ENST00000502818 AJAP1Q9UKB5 411 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms