RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ST3GAL5Q9UNP4 418 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 SLC4A7Q9Y6M7 1214 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 ZBBXA8MT70 800 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 CAPSQ13938 189 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 FAM102BQ5T8I3 360 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 FTHL17Q9BXU8 183 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 NFKBIZQ9BYH8 718 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 INO80BQ9C086 356 aaPredicted RBP27.86■■■□□ 2.05
LSM6-202ENST00000502781 TMX1Q9H3N1 280 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.85■■■□□ 2.05
LSM6-202ENST00000502781 SRGAP2CP0DJJ0 459 aa27.85■■■□□ 2.05
LSM6-202ENST00000502781 PTENP60484 403 aa27.85■■■□□ 2.05
LSM6-202ENST00000502781 TFDP1Q14186 410 aa27.85■■■□□ 2.05
LSM6-202ENST00000502781 RRAGBQ5VZM2 374 aa27.85■■■□□ 2.05
LSM6-202ENST00000502781 SRGAP1Q7Z6B7 1085 aa27.85■■■□□ 2.05
LSM6-202ENST00000502781 DAW1Q8N136 415 aa27.85■■■□□ 2.05
LSM6-202ENST00000502781 PHOSPHO2Q8TCD6 241 aa27.85■■■□□ 2.05
LSM6-202ENST00000502781 LARP4BQ92615 738 aaKnown RBP27.85■■■□□ 2.05
LSM6-202ENST00000502781 KIFAP3Q92845 792 aa27.85■■■□□ 2.05
LSM6-202ENST00000502781 TIPINQ9BVW5 301 aa27.85■■■□□ 2.05
LSM6-202ENST00000502781 CSDE1O75534 798 aaKnown RBP27.84■■■□□ 2.05
LSM6-202ENST00000502781 NFX1Q12986 1120 aaKnown RBP27.84■■■□□ 2.05
LSM6-202ENST00000502781 MAPK7Q13164 816 aa27.84■■■□□ 2.05
LSM6-202ENST00000502781 MCM6Q14566 821 aa27.84■■■□□ 2.05
LSM6-202ENST00000502781 ARSHQ5FYA8 562 aa27.84■■■□□ 2.05
LSM6-202ENST00000502781 RESP18Q5W5W9 173 aa27.84■■■□□ 2.05
LSM6-202ENST00000502781 FAM109BQ6ICB4 259 aaPredicted RBP27.84■■■□□ 2.05
LSM6-202ENST00000502781 CCDC73Q6ZRK6 1079 aa27.84■■■□□ 2.05
LSM6-202ENST00000502781 RTN4RL1Q86UN2 441 aaPredicted RBP27.84■■■□□ 2.05
LSM6-202ENST00000502781 LINC01599Q8WXQ3 324 aa27.84■■■□□ 2.05
LSM6-202ENST00000502781 BSNDQ8WZ55 320 aa27.84■■■□□ 2.05
LSM6-202ENST00000502781 SLC9A7Q96T83 725 aa27.84■■■□□ 2.05
LSM6-202ENST00000502781 CHMP5Q9NZZ3 219 aa27.84■■■□□ 2.05
LSM6-202ENST00000502781 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.83■■■□□ 2.05
LSM6-202ENST00000502781 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.83■■■□□ 2.05
LSM6-202ENST00000502781 SSBP05455 408 aaKnown RBP eCLIP27.83■■■□□ 2.05
LSM6-202ENST00000502781 ADALQ6DHV7 355 aa27.83■■■□□ 2.05
LSM6-202ENST00000502781 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.83■■■□□ 2.05
LSM6-202ENST00000502781 TSPYL2Q9H2G4 693 aaPredicted RBP27.83■■■□□ 2.05
LSM6-202ENST00000502781 MINDY3Q9H8M7 445 aa27.83■■■□□ 2.05
LSM6-202ENST00000502781 MICAL3Q7RTP6 2002 aa27.82■■■□□ 2.04
LSM6-202ENST00000502781 ENPP3O14638 875 aa27.82■■■□□ 2.04
LSM6-202ENST00000502781 HIP1RO75146 1068 aa27.82■■■□□ 2.04
LSM6-202ENST00000502781 PHKA2P46019 1235 aa27.82■■■□□ 2.04
LSM6-202ENST00000502781 KCNJ6P48051 423 aa27.82■■■□□ 2.04
LSM6-202ENST00000502781 DEFB103AP81534 67 aa27.82■■■□□ 2.04
LSM6-202ENST00000502781 DSC3Q14574 896 aa27.82■■■□□ 2.04
LSM6-202ENST00000502781 E2F4Q16254 413 aa27.82■■■□□ 2.04
LSM6-202ENST00000502781 POLD4Q9HCU8 107 aa27.82■■■□□ 2.04
LSM6-202ENST00000502781 TCHHQ07283 1943 aa27.81■■■□□ 2.04
LSM6-202ENST00000502781 MGEA5O60502 916 aa27.81■■■□□ 2.04
LSM6-202ENST00000502781 ATP2A2P16615 1042 aaKnown RBP27.81■■■□□ 2.04
LSM6-202ENST00000502781 FGFR4P22455 802 aa27.81■■■□□ 2.04
LSM6-202ENST00000502781 SFPQP23246 707 aaKnown RBP eCLIP27.81■■■□□ 2.04
LSM6-202ENST00000502781 SMAD3P84022 425 aaKnown RBP27.81■■■□□ 2.04
LSM6-202ENST00000502781 CDCA2Q69YH5 1023 aaPredicted RBP27.81■■■□□ 2.04
LSM6-202ENST00000502781 PANK2Q9BZ23 570 aa27.81■■■□□ 2.04
LSM6-202ENST00000502781 NAMPTP43490 491 aa27.8■■■□□ 2.04
LSM6-202ENST00000502781 GPBP1Q86WP2 473 aa27.8■■■□□ 2.04
LSM6-202ENST00000502781 PDILTQ8N807 584 aa27.8■■■□□ 2.04
LSM6-202ENST00000502781 DRC1Q96MC2 740 aa27.8■■■□□ 2.04
LSM6-202ENST00000502781 IPO9Q96P70 1041 aaKnown RBP27.8■■■□□ 2.04
LSM6-202ENST00000502781 C17orf75Q9HAS0 396 aa27.8■■■□□ 2.04
LSM6-202ENST00000502781 SOX1O00570 391 aaPredicted RBP27.79■■■□□ 2.04
LSM6-202ENST00000502781 CMA1P23946 247 aa27.79■■■□□ 2.04
LSM6-202ENST00000502781 STAT6P42226 847 aa27.79■■■□□ 2.04
LSM6-202ENST00000502781 PPP2R5AQ15172 486 aa27.79■■■□□ 2.04
LSM6-202ENST00000502781 PCBP1Q15365 356 aaKnown RBP eCLIP27.79■■■□□ 2.04
LSM6-202ENST00000502781 CRIPAKQ8N1N5 446 aa27.79■■■□□ 2.04
LSM6-202ENST00000502781 GDPD2Q9HCC8 539 aa27.79■■■□□ 2.04
LSM6-202ENST00000502781 FAM13BQ9NYF5 915 aa27.79■■■□□ 2.04
LSM6-202ENST00000502781 ODF2LQ9ULJ1 636 aa27.79■■■□□ 2.04
LSM6-202ENST00000502781 GRXCR1A8MXD5 290 aa27.78■■■□□ 2.04
LSM6-202ENST00000502781 AMHP03971 560 aa27.78■■■□□ 2.04
LSM6-202ENST00000502781 MBTD1Q05BQ5 628 aa27.78■■■□□ 2.04
LSM6-202ENST00000502781 DHX8Q14562 1220 aaKnown RBP27.78■■■□□ 2.04
LSM6-202ENST00000502781 HERC6Q8IVU3 1022 aa27.78■■■□□ 2.04
LSM6-202ENST00000502781 TOP1MTQ969P6 601 aa27.78■■■□□ 2.04
LSM6-202ENST00000502781 REEP2Q9BRK0 252 aa27.78■■■□□ 2.04
LSM6-202ENST00000502781 CUEDC2Q9H467 287 aa27.78■■■□□ 2.04
LSM6-202ENST00000502781 CHST12Q9NRB3 414 aa27.78■■■□□ 2.04
LSM6-202ENST00000502781 RGS18Q9NS28 235 aa27.78■■■□□ 2.04
LSM6-202ENST00000502781 NPHP3-ACAD11A0A0J9YXS1 232 aa27.77■■■□□ 2.04
LSM6-202ENST00000502781 FAM237AA0A1B0GTK4 181 aa27.77■■■□□ 2.04
LSM6-202ENST00000502781 LRRIQ4A6NIV6 560 aa27.77■■■□□ 2.04
LSM6-202ENST00000502781 RAD51AP2Q09MP3 1159 aa27.77■■■□□ 2.04
LSM6-202ENST00000502781 SV2BQ7L1I2 683 aa27.77■■■□□ 2.04
LSM6-202ENST00000502781 MYOCDQ8IZQ8 938 aa27.77■■■□□ 2.04
LSM6-202ENST00000502781 IFT74Q96LB3 600 aa27.77■■■□□ 2.04
LSM6-202ENST00000502781 ADAM2Q99965 735 aa27.77■■■□□ 2.04
LSM6-202ENST00000502781 A0A1W2PQ27 194 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 A0A1W2PQ64 194 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 A0A1W2PQD8 194 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 C9IYK1 514 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 GJB5O95377 273 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 ZNF131P52739 623 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 GIT2Q14161 759 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 AMHR2Q16671 573 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 CATSPER4Q7RTX7 472 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 IQUBQ8NA54 791 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms