RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 ACSS2Q9NR19 701 aa3.84□□□□□ -1.79
SCLT1-203ENST00000502495 GNL3LQ9NVN8 582 aaKnown RBP3.84□□□□□ -1.79
SCLT1-203ENST00000502495 DTLQ9NZJ0 730 aa3.84□□□□□ -1.79
SCLT1-203ENST00000502495 PNMA2Q9UL42 364 aa3.84□□□□□ -1.79
SCLT1-203ENST00000502495 DHX57Q6P158 1386 aaKnown RBP3.84□□□□□ -1.79
SCLT1-203ENST00000502495 WASHC2CQ9Y4E1 1318 aa3.84□□□□□ -1.79
SCLT1-203ENST00000502495 ZMYM4Q5VZL5 1548 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.84□□□□□ -1.8
SCLT1-203ENST00000502495 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.84□□□□□ -1.8
SCLT1-203ENST00000502495 CCDC189A1A4V9 331 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 MAFGO15525 162 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 TGM5O43548 720 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 C4BPAP04003 597 aaKnown RBP3.84□□□□□ -1.8
SCLT1-203ENST00000502495 CYP17A1P05093 508 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 PTX3P26022 381 aaPredicted RBP3.84□□□□□ -1.8
SCLT1-203ENST00000502495 ITKQ08881 620 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 ZNF827Q17R98 1081 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 BROXQ5VW32 411 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 NME8Q8N427 588 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 TTLL11Q8NHH1 800 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 ERCC4Q92889 916 aaPredicted RBP3.84□□□□□ -1.8
SCLT1-203ENST00000502495 MTMR8Q96EF0 704 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 IL17RAQ96F46 866 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 SLC39A13Q96H72 371 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 MPHOSPH9Q99550 1183 aa3.84□□□□□ -1.8
SCLT1-203ENST00000502495 LAS1LQ9Y4W2 734 aaKnown RBP3.84□□□□□ -1.8
SCLT1-203ENST00000502495 INO80Q9ULG1 1556 aaPredicted RBP3.83□□□□□ -1.8
SCLT1-203ENST00000502495 PPRC1Q5VV67 1664 aaKnown RBP3.83□□□□□ -1.8
SCLT1-203ENST00000502495 HECW2Q9P2P5 1572 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 A2MP01023 1474 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 NUP155O75694 1391 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 HRKO00198 91 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 FOXP2O15409 715 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 WDHD1O75717 1129 aaPredicted RBP3.83□□□□□ -1.8
SCLT1-203ENST00000502495 SCGB1D2O95969 90 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 LRG1P02750 347 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 MYL1P05976 194 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 ASGR2P07307 311 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 MMEP08473 750 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 NCKAP1LP55160 1127 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 NKX3-2P78367 333 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 MTMR1Q13613 665 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 DHX8Q14562 1220 aaKnown RBP3.83□□□□□ -1.8
SCLT1-203ENST00000502495 BRD3Q15059 726 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 LRRC41Q15345 812 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 SYCP2LQ5T4T6 812 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 CD300LDQ6UXZ3 194 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 ZC3H18Q86VM9 953 aaKnown RBP3.83□□□□□ -1.8
SCLT1-203ENST00000502495 MIB1Q86YT6 1006 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 SAMD3Q8N6K7 520 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 CNTD1Q8N815 330 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 HIPK4Q8NE63 616 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 GBP4Q96PP9 640 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 PDGFDQ9GZP0 370 aaPredicted RBP3.83□□□□□ -1.8
SCLT1-203ENST00000502495 PUS7LQ9H0K6 701 aaKnown RBP3.83□□□□□ -1.8
SCLT1-203ENST00000502495 ARNT2Q9HBZ2 717 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 RICTORQ6R327 1708 aa3.83□□□□□ -1.8
SCLT1-203ENST00000502495 KIDINS220Q9ULH0 1771 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 ATP10AO60312 1499 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 KANK1Q14678 1352 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 SHTN1A0MZ66 631 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 K7ESM1 405 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 PRKD3O94806 890 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 NCAM1P13591 858 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 ATF3P18847 181 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 SDHAP31040 664 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 LSP1P33241 339 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 MC3RP41968 323 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 SESN3P58005 492 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 HERVK_113P62684 666 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 SMAD3P84022 425 aaKnown RBP3.82□□□□□ -1.8
SCLT1-203ENST00000502495 MCL1Q07820 350 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 TERF2Q15554 542 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 SMAD2Q15796 467 aaKnown RBP3.82□□□□□ -1.8
SCLT1-203ENST00000502495 CATSPEREQ5SY80 951 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 PPP4R4Q6NUP7 873 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 TEPPQ6URK8 271 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 LDHDQ86WU2 507 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 ZZZ3Q8IYH5 903 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 FAM26EQ8N5C1 309 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 CLRN3Q8NCR9 226 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 SMAD5Q99717 465 aaKnown RBP3.82□□□□□ -1.8
SCLT1-203ENST00000502495 TRIM8Q9BZR9 551 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 CCDC8Q9H0W5 538 aaPredicted RBP3.82□□□□□ -1.8
SCLT1-203ENST00000502495 ADAM7Q9H2U9 754 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 VTA1Q9NP79 307 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 ARHGAP28Q9P2N2 729 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 NOC2LQ9Y3T9 749 aaKnown RBP3.82□□□□□ -1.8
SCLT1-203ENST00000502495 EIF2AK4Q9P2K8 1649 aaKnown RBP3.82□□□□□ -1.8
SCLT1-203ENST00000502495 KDM5DQ9BY66 1539 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 REREQ9P2R6 1566 aa3.82□□□□□ -1.8
SCLT1-203ENST00000502495 TSPOAP1O95153 1857 aa3.81□□□□□ -1.8
SCLT1-203ENST00000502495 RASSF10A6NK89 507 aa3.81□□□□□ -1.8
SCLT1-203ENST00000502495 PFKLP17858 780 aa3.81□□□□□ -1.8
SCLT1-203ENST00000502495 CD40P25942 277 aa3.81□□□□□ -1.8
SCLT1-203ENST00000502495 FNTBP49356 437 aa3.81□□□□□ -1.8
SCLT1-203ENST00000502495 SETQ01105 290 aaPredicted RBP3.81□□□□□ -1.8
SCLT1-203ENST00000502495 DBPQ10586 325 aaPredicted RBP3.81□□□□□ -1.8
SCLT1-203ENST00000502495 FAPQ12884 760 aa3.81□□□□□ -1.8
SCLT1-203ENST00000502495 HLTFQ14527 1009 aaKnown RBP eCLIP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms