RNA–Protein interactions for RNA: ENST00000498793.5

SCMH1-217, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-217ENST00000498793 GLRA2P23416 452 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 EIF4BP23588 611 aaKnown RBP12.92□□□□□ -0.34
SCMH1-217ENST00000498793 TMOD1P28289 359 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 ORC2Q13416 577 aaPredicted RBP12.92□□□□□ -0.34
SCMH1-217ENST00000498793 SPECC1Q5M775 1068 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 HSCBQ8IWL3 235 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 IGSF22Q8N9C0 903 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 RNF169Q8NCN4 708 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 NEK9Q8TD19 979 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 SLC7A3Q8WY07 619 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 LPPQ93052 612 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 MTRQ99707 1265 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 POLR3CQ9BUI4 534 aaPredicted RBP12.92□□□□□ -0.34
SCMH1-217ENST00000498793 KIFC3Q9BVG8 833 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 TUFT1Q9NNX1 390 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 DDX19AQ9NUU7 478 aaKnown RBP12.92□□□□□ -0.34
SCMH1-217ENST00000498793 LRWD1Q9UFC0 647 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 KIAA1024Q9UPX6 916 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 C5orf42Q9H799 3197 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 DENND3A2RUS2 1198 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 B4GALT5O43286 388 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 DGKIO75912 1065 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 RPA1P27694 616 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 RFC5P40937 340 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 SF3A1Q15459 793 aaKnown RBP12.91□□□□□ -0.34
SCMH1-217ENST00000498793 RILPL1Q5EBL4 403 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 USP49Q70CQ1 688 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 CDR2LQ86X02 465 aaPredicted RBP12.91□□□□□ -0.34
SCMH1-217ENST00000498793 NPAS4Q8IUM7 802 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 RNF149Q8NC42 400 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 PSPC1Q8WXF1 523 aaKnown RBP12.91□□□□□ -0.34
SCMH1-217ENST00000498793 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 RUSC1Q9BVN2 902 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 ATP6V0A4Q9HBG4 840 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 ANKEF1Q9NU02 776 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 SQORQ9Y6N5 450 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 CITO14578 2027 aa12.91□□□□□ -0.34
SCMH1-217ENST00000498793 ARHGEF35A5YM69 484 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 DKC1O60832 514 aaKnown RBP eCLIP12.9□□□□□ -0.34
SCMH1-217ENST00000498793 MARCKSP29966 332 aaPredicted RBP12.9□□□□□ -0.34
SCMH1-217ENST00000498793 ARL2P36404 184 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 PBX3P40426 434 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 SARSP49591 514 aaKnown RBP12.9□□□□□ -0.34
SCMH1-217ENST00000498793 ERVK-21P61565 698 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 PTPAQ15257 358 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 CLLU1OSQ5K130 101 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 OTUD6AQ7L8S5 288 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 ZNF689Q96CS4 500 aaPredicted RBP12.9□□□□□ -0.34
SCMH1-217ENST00000498793 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
SCMH1-217ENST00000498793 CCDC43Q96MW1 224 aaKnown RBP12.9□□□□□ -0.34
SCMH1-217ENST00000498793 CLIC6Q96NY7 704 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 TGS1Q96RS0 853 aaKnown RBP12.9□□□□□ -0.34
SCMH1-217ENST00000498793 USP28Q96RU2 1077 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 GCOM2Q9BZD3 368 aaPredicted RBP12.9□□□□□ -0.34
SCMH1-217ENST00000498793 BHMT2Q9H2M3 363 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 RGS18Q9NS28 235 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 PIN4Q9Y237 131 aaKnown RBP12.9□□□□□ -0.34
SCMH1-217ENST00000498793 INSL6Q9Y581 213 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 PCDHGC5Q9Y5F6 944 aa12.9□□□□□ -0.34
SCMH1-217ENST00000498793 PDCD11Q14690 1871 aaKnown RBP12.9□□□□□ -0.34
SCMH1-217ENST00000498793 NPHP3-ACAD11A0A0J9YXS1 232 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 TBKBP1A7MCY6 615 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 GPR182O15218 404 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 STX6O43752 255 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 B4GALT3O60512 393 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 RPLP2P05387 115 aaKnown RBP12.89□□□□□ -0.35
SCMH1-217ENST00000498793 CTNNB1P35222 781 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 PRPHP41219 470 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 DNM2P50570 870 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 CACNB1Q02641 598 aaPredicted RBP12.89□□□□□ -0.35
SCMH1-217ENST00000498793 RAD51AP2Q09MP3 1159 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 BTG3Q14201 252 aaPredicted RBP12.89□□□□□ -0.35
SCMH1-217ENST00000498793 EPC2Q52LR7 807 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 UBXN11Q5T124 520 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 DTHD1Q6ZMT9 781 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 CATSPER4Q7RTX7 472 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 BRAPQ7Z569 592 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 ECHDC2Q86YB7 292 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 DAW1Q8N136 415 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 GAS2L1Q99501 681 aaPredicted RBP12.89□□□□□ -0.35
SCMH1-217ENST00000498793 FTHL17Q9BXU8 183 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 MTCH2Q9Y6C9 303 aa12.89□□□□□ -0.35
SCMH1-217ENST00000498793 LRRIQ4A6NIV6 560 aa12.88□□□□□ -0.35
SCMH1-217ENST00000498793 TSPAN1O60635 241 aa12.88□□□□□ -0.35
SCMH1-217ENST00000498793 LIG1P18858 919 aa12.88□□□□□ -0.35
SCMH1-217ENST00000498793 HOXA11P31270 313 aaPredicted RBP12.88□□□□□ -0.35
SCMH1-217ENST00000498793 AFF1P51825 1210 aaKnown RBP12.88□□□□□ -0.35
SCMH1-217ENST00000498793 MBTD1Q05BQ5 628 aa12.88□□□□□ -0.35
SCMH1-217ENST00000498793 MAPK7Q13164 816 aa12.88□□□□□ -0.35
SCMH1-217ENST00000498793 KARSQ15046 597 aaKnown RBP12.88□□□□□ -0.35
SCMH1-217ENST00000498793 AMHR2Q16671 573 aa12.88□□□□□ -0.35
SCMH1-217ENST00000498793 TMEM119Q4V9L6 283 aa12.88□□□□□ -0.35
SCMH1-217ENST00000498793 LRRC55Q6ZSA7 311 aa12.88□□□□□ -0.35
SCMH1-217ENST00000498793 ZNF598Q86UK7 904 aaKnown RBP12.88□□□□□ -0.35
SCMH1-217ENST00000498793 ZNF410Q86VK4 478 aa12.88□□□□□ -0.35
SCMH1-217ENST00000498793 TMEM192Q8IY95 271 aa12.88□□□□□ -0.35
SCMH1-217ENST00000498793 ERMNQ8TAM6 284 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms