RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 TMX1Q9H3N1 280 aa18.6■□□□□ 0.57
PRKCB-210ENST00000498739 IFT122Q9HBG6 1241 aa18.6■□□□□ 0.57
PRKCB-210ENST00000498739 DENND3A2RUS2 1198 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 ENPP3O14638 875 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 CUTAO60888 179 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 PLA2G4BP0C869 781 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 SFPQP23246 707 aaKnown RBP eCLIP18.59■□□□□ 0.57
PRKCB-210ENST00000498739 PBX2P40425 430 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 PHKA2P46019 1235 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 ME1P48163 572 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 KRT85P78386 507 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 RINT1Q6NUQ1 792 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 SYT2Q8N9I0 419 aaPredicted RBP18.59■□□□□ 0.57
PRKCB-210ENST00000498739 LRRC15Q8TF66 581 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 ZBED2Q9BTP6 218 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 RUSC1Q9BVN2 902 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 PBX4Q9BYU1 374 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 POLD4Q9HCU8 107 aa18.59■□□□□ 0.57
PRKCB-210ENST00000498739 RANBP2P49792 3224 aaKnown RBP18.59■□□□□ 0.57
PRKCB-210ENST00000498739 LRRIQ4A6NIV6 560 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 MGEA5O60502 916 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 UPP2O95045 317 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 DNAJB2P25686 324 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 SLC12A3P55017 1021 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 DHX8Q14562 1220 aaKnown RBP18.58■□□□□ 0.56
PRKCB-210ENST00000498739 RAB30Q15771 203 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 CATSPER4Q7RTX7 472 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 SRGAP1Q7Z6B7 1085 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 RTN4RL1Q86UN2 441 aaPredicted RBP18.58■□□□□ 0.56
PRKCB-210ENST00000498739 ADAM2Q99965 735 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 BLOC1S4Q9NUP1 217 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 MSRAQ9UJ68 235 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 RCOR1Q9UKL0 485 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 LOXHD1Q8IVV2 1947 aa18.58■□□□□ 0.56
PRKCB-210ENST00000498739 MICAL3Q7RTP6 2002 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 TLL1O43897 1013 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 ZSCAN20P17040 1043 aaPredicted RBP18.57■□□□□ 0.56
PRKCB-210ENST00000498739 IBSPP21815 317 aaPredicted RBP18.57■□□□□ 0.56
PRKCB-210ENST00000498739 RAD51AP2Q09MP3 1159 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 MCM6Q14566 821 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 RRAGBQ5VZM2 374 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 C1orf186Q6ZWK4 172 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 LARP4BQ92615 738 aaKnown RBP18.57■□□□□ 0.56
PRKCB-210ENST00000498739 RAD54LQ92698 747 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 KIFAP3Q92845 792 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 TOP1MTQ969P6 601 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 SPATA32Q96LK8 384 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 TSPYL2Q9H2G4 693 aaPredicted RBP18.57■□□□□ 0.56
PRKCB-210ENST00000498739 MINDY3Q9H8M7 445 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 RGS18Q9NS28 235 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 PCDHA7Q9UN72 937 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 PCDHA11Q9Y5I1 949 aa18.57■□□□□ 0.56
PRKCB-210ENST00000498739 INO80B-WBP1J3KQ70 363 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 HIP1RO75146 1068 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 GJB5O95377 273 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 MYOGP15173 224 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 PTENP60484 403 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 POU5F1BQ06416 359 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 FAM43BQ6ZT52 329 aaPredicted RBP18.56■□□□□ 0.56
PRKCB-210ENST00000498739 GPBP1Q86WP2 473 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 BSNDQ8WZ55 320 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 TIFAQ96CG3 184 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 IFT74Q96LB3 600 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 PANK2Q9BZ23 570 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 NKX2-4Q9H2Z4 354 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 STK17AQ9UEE5 414 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 PIN4Q9Y237 131 aaKnown RBP18.56■□□□□ 0.56
PRKCB-210ENST00000498739 YBX2Q9Y2T7 364 aaKnown RBP18.56■□□□□ 0.56
PRKCB-210ENST00000498739 PTPRSQ13332 1948 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 TRIOBPQ9H2D6 2365 aa18.56■□□□□ 0.56
PRKCB-210ENST00000498739 GUCY2CP25092 1073 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 STAT6P42226 847 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 NAMPTP43490 491 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 DSC3Q14574 896 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 PPP2R5AQ15172 486 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 AXDND1Q5T1B0 1012 aaPredicted RBP18.55■□□□□ 0.56
PRKCB-210ENST00000498739 SHC4Q6S5L8 630 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 CCDC73Q6ZRK6 1079 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 IFNLR1Q8IU57 520 aaPredicted RBP18.55■□□□□ 0.56
PRKCB-210ENST00000498739 ZBTB8OSQ8IWT0 167 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 PDILTQ8N807 584 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 DEPTORQ8TB45 409 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 LEO1Q8WVC0 666 aaPredicted RBP18.55■□□□□ 0.56
PRKCB-210ENST00000498739 DRC1Q96MC2 740 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 TIPINQ9BVW5 301 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 C1orf112Q9NSG2 853 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 KCND2Q9NZV8 630 aa18.55■□□□□ 0.56
PRKCB-210ENST00000498739 A0A087X0B3 334 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 NPHP3-ACAD11A0A0J9YXS1 232 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 ERLIN2O94905 339 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 CA3P07451 260 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 SARSP49591 514 aaKnown RBP18.54■□□□□ 0.56
PRKCB-210ENST00000498739 CACNB1Q02641 598 aaPredicted RBP18.54■□□□□ 0.56
PRKCB-210ENST00000498739 MBTD1Q05BQ5 628 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 MAPK7Q13164 816 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 ZNF697Q5TEC3 545 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 SLC24A5Q71RS6 500 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 DAW1Q8N136 415 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 YME1L1Q96TA2 773 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 RAD9AQ99638 391 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms