RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 KPNA6O60684 536 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 NEFLP07196 543 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 ZFYP08048 801 aaPredicted RBP6.49□□□□□ -1.37
SPTA1-209ENST00000498708 SLC3A2P08195 630 aaKnown RBP6.49□□□□□ -1.37
SPTA1-209ENST00000498708 FURINP09958 794 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 GNAT2P19087 354 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 CLDN10P78369 228 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 RRP12Q5JTH9 1297 aaKnown RBP6.49□□□□□ -1.37
SPTA1-209ENST00000498708 TTBK2Q6IQ55 1244 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 FAM160B2Q86V87 743 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 SUMF1Q8NBK3 374 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 GMCL1P1Q8NEA9 526 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 SPPL3Q8TCT6 385 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 ATP8B4Q8TF62 1192 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 CHURC1Q8WUH1 139 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 CLP1Q92989 425 aaKnown RBP6.49□□□□□ -1.37
SPTA1-209ENST00000498708 TRIM11Q96F44 468 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 APOL5Q9BWW9 433 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 IFIH1Q9BYX4 1025 aaKnown RBP6.49□□□□□ -1.37
SPTA1-209ENST00000498708 NACAP1Q9BZK3 213 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 ZNF287Q9HBT7 754 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 CYP39A1Q9NYL5 469 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 GTF2IRD1Q9UHL9 959 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 CCPG1Q9ULG6 757 aa6.49□□□□□ -1.37
SPTA1-209ENST00000498708 FRMPD2Q68DX3 1309 aaPredicted RBP6.49□□□□□ -1.37
SPTA1-209ENST00000498708 MYH7BA7E2Y1 1941 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 GREB1LQ9C091 1923 aaPredicted RBP6.48□□□□□ -1.37
SPTA1-209ENST00000498708 CEP295Q9C0D2 2601 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 UNC79Q9P2D8 2635 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 MYH4Q9Y623 1939 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 CACNA1IQ9P0X4 2223 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 PTPDC1A2A3K4 754 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 ITGB1P05556 798 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 PDIA4P13667 645 aaKnown RBP6.48□□□□□ -1.37
SPTA1-209ENST00000498708 SDHBP21912 280 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 CHRNA4P43681 627 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 OAZ1P54368 228 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 SPEM2Q0P670 501 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 PTK7Q13308 1070 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 BAATQ14032 418 aaPredicted RBP6.48□□□□□ -1.37
SPTA1-209ENST00000498708 HIF1AQ16665 826 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 BRDTQ58F21 947 aaPredicted RBP6.48□□□□□ -1.37
SPTA1-209ENST00000498708 PRRT3Q5FWE3 981 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 VPS53Q5VIR6 699 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 RCSD1Q6JBY9 416 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 SIX5Q8N196 739 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 POF1BQ8WVV4 589 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 TNFRSF25Q93038 417 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 CEP63Q96MT8 703 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 MDFIQ99750 246 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 TSPAN10Q9H1Z9 355 aaPredicted RBP6.48□□□□□ -1.37
SPTA1-209ENST00000498708 DCTPP1Q9H773 170 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 TLE6Q9H808 572 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 IL17RBQ9NRM6 502 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 KIAA1024Q9UPX6 916 aa6.48□□□□□ -1.37
SPTA1-209ENST00000498708 DSPP15924 2871 aaKnown RBP6.47□□□□□ -1.37
SPTA1-209ENST00000498708 CYSRT1A8MQ03 144 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 RSPH10B2B2RC85 870 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 NFIBO00712 420 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 ARIH2O95376 493 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 RSPH10BP0C881 870 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 CALML3P27482 149 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 HAND2P61296 217 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 SFSWAPQ12872 951 aaKnown RBP6.47□□□□□ -1.37
SPTA1-209ENST00000498708 TKFCQ3LXA3 575 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 PPM1JQ5JR12 505 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 ZMYM1Q5SVZ6 1142 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 SYCE2Q6PIF2 218 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 SLC30A10Q6XR72 485 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 PI4K2BQ8TCG2 481 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 AFG1LQ8WV93 481 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 PPP2R3CQ969Q6 453 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 UCN2Q96RP3 112 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 RTKNQ9BST9 563 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 ALG1Q9BT22 464 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 RC3H2Q9HBD1 1191 aaKnown RBP6.47□□□□□ -1.37
SPTA1-209ENST00000498708 ERVK-5Q9HDB9 667 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 BRD7Q9NPI1 651 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.47□□□□□ -1.37
SPTA1-209ENST00000498708 RWDD3Q9Y3V2 267 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 EMSYQ7Z589 1322 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 ADGRA3Q8IWK6 1321 aa6.47□□□□□ -1.37
SPTA1-209ENST00000498708 FOXP2O15409 715 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 MMP3P08254 477 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 SP9P0CG40 484 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 TXNP10599 105 aaKnown RBP6.46□□□□□ -1.38
SPTA1-209ENST00000498708 TGM1P22735 817 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 THPOP40225 353 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 TECP42680 631 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 ALDH5A1P51649 535 aaPredicted RBP6.46□□□□□ -1.38
SPTA1-209ENST00000498708 DMWDQ09019 674 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 KCNC3Q14003 757 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 BTG3Q14201 252 aaPredicted RBP6.46□□□□□ -1.38
SPTA1-209ENST00000498708 PPP2R5BQ15173 497 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 SYDE2Q5VT97 1194 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 ANKRD54Q6NXT1 300 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 STAG2Q8N3U4 1231 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 C7orf31Q8N865 590 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 KLHL23Q8NBE8 558 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 SEPT8Q92599 483 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms