RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 ZNF541Q9H0D2 1346 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 ATRNL1Q5VV63 1379 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 DCDC2CA8MYV0 355 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 TCP10L2B9ZVM9 353 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 PGRMC1O00264 195 aaKnown RBP17.8■□□□□ 0.44
COL6A1-206ENST00000498614 DAPK3O43293 454 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 TBCAO75347 108 aaKnown RBP17.8■□□□□ 0.44
COL6A1-206ENST00000498614 EGFRP00533 1210 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 UBXN2AP68543 259 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 GPR162Q16538 588 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 CCDC121Q6ZUS5 278 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 IKZF4Q9H2S9 585 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 CXorf56Q9H5V9 222 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.8■□□□□ 0.44
COL6A1-206ENST00000498614 LRRC4CQ9HCJ2 640 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 LTBP3Q9NS15 1303 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 IGLV3-22A0A075B6J6 115 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 PDXKO00764 312 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 ENTPD3O75355 529 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 XRCC5P13010 732 aaKnown RBP17.8■□□□□ 0.44
COL6A1-206ENST00000498614 STAT2P52630 851 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 BIRC3Q13489 604 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 CCDC174Q6PII3 467 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
COL6A1-206ENST00000498614 ACER1Q8TDN7 264 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 SPAG5Q96R06 1193 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.8■□□□□ 0.44
COL6A1-206ENST00000498614 WDR18Q9BV38 432 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 OSBPL7Q9BZF2 842 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 AMACRQ9UHK6 382 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 NAGPAQ9UK23 515 aa17.8■□□□□ 0.44
COL6A1-206ENST00000498614 NOVA2Q9UNW9 492 aaKnown RBP17.8■□□□□ 0.44
COL6A1-206ENST00000498614 CLRN2A0PK11 232 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 TMCO5BA8MYB1 307 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 FZD9O00144 591 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 KRIT1O00522 736 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 EYA4O95677 639 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 NR3C1P04150 777 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 UCHL3P15374 230 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 PPP2R2AP63151 447 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 DRP2Q13474 957 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 EXOC3L4Q17RC7 722 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 ODF2Q5BJF6 829 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 RUFY4Q6ZNE9 571 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 OGFOD1Q8N543 542 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 TPCN2Q8NHX9 752 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 RAPGEF5Q92565 580 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 CALR3Q96L12 384 aaKnown RBP17.79■□□□□ 0.44
COL6A1-206ENST00000498614 CCDC114Q96M63 670 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 POLR3CQ9BUI4 534 aaPredicted RBP17.79■□□□□ 0.44
COL6A1-206ENST00000498614 TYW1Q9NV66 732 aaKnown RBP17.79■□□□□ 0.44
COL6A1-206ENST00000498614 DNM1LO00429 736 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 ZBTB39O15060 712 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 CHUKO15111 745 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 CYP3A4P08684 503 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 LMNB1P20700 586 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 PON1P27169 355 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 BYSLQ13895 437 aaKnown RBP17.79■□□□□ 0.44
COL6A1-206ENST00000498614 C10orf76Q5T2E6 689 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 RINT1Q6NUQ1 792 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 ALKBH5Q6P6C2 394 aaKnown RBP17.79■□□□□ 0.44
COL6A1-206ENST00000498614 TPH2Q8IWU9 490 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 DYDC2Q96IM9 177 aa17.79■□□□□ 0.44
COL6A1-206ENST00000498614 AGBL2Q5U5Z8 902 aa17.78■□□□□ 0.44
COL6A1-206ENST00000498614 RBM46Q8TBY0 533 aaKnown RBP17.78■□□□□ 0.44
COL6A1-206ENST00000498614 SEC16BQ96JE7 1060 aa17.78■□□□□ 0.44
COL6A1-206ENST00000498614 RNF181Q9P0P0 153 aa17.78■□□□□ 0.44
COL6A1-206ENST00000498614 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.78■□□□□ 0.44
COL6A1-206ENST00000498614 PCDHB13Q9Y5F0 798 aa17.78■□□□□ 0.44
COL6A1-206ENST00000498614 STK24Q9Y6E0 443 aa17.78■□□□□ 0.44
COL6A1-206ENST00000498614 PIK3CDO00329 1044 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 TTI1O43156 1089 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 NMT1P30419 496 aaKnown RBP17.77■□□□□ 0.44
COL6A1-206ENST00000498614 MAGOHP61326 146 aaKnown RBP17.77■□□□□ 0.44
COL6A1-206ENST00000498614 IFI16Q16666 785 aaKnown RBP17.77■□□□□ 0.44
COL6A1-206ENST00000498614 TMC3Q7Z5M5 1100 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 C3orf20Q8ND61 904 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 MAGOHBQ96A72 148 aaKnown RBP17.77■□□□□ 0.44
COL6A1-206ENST00000498614 CELF4Q9BZC1 486 aaKnown RBP17.77■□□□□ 0.44
COL6A1-206ENST00000498614 ACTR5Q9H9F9 607 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-206ENST00000498614 AJAP1Q9UKB5 411 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-206ENST00000498614 GOLGA6L7A0A1B0GV03 622 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 GMPSP49915 693 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-206ENST00000498614 EPHA7Q15375 998 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 ZYXQ15942 572 aaKnown RBP17.77■□□□□ 0.44
COL6A1-206ENST00000498614 BMT2Q1RMZ1 405 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 ANKRD20A8PQ5CZ79 823 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 LRCH2Q5VUJ6 765 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 OTOP1Q7RTM1 612 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 PEX26Q7Z412 305 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 STXBP5LQ9Y2K9 1186 aa17.77■□□□□ 0.44
COL6A1-206ENST00000498614 SLITRK3O94933 977 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 FAM13AO94988 1023 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 MTMR3Q13615 1198 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 TNIP1Q15025 636 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 NBPF9Q3BBW0 867 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 ZC2HC1CQ53FD0 456 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-206ENST00000498614 GJB7Q6PEY0 223 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 SAMD7Q7Z3H4 446 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 KSR1Q8IVT5 923 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms