RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 LRRC55Q6ZSA7 311 aa18■□□□□ 0.47
NR1H3-227ENST00000498548 ZNF410Q86VK4 478 aa18■□□□□ 0.47
NR1H3-227ENST00000498548 POF1BQ8WVV4 589 aa18■□□□□ 0.47
NR1H3-227ENST00000498548 PRPF31Q8WWY3 499 aaKnown RBP18■□□□□ 0.47
NR1H3-227ENST00000498548 SLC7A3Q8WY07 619 aa18■□□□□ 0.47
NR1H3-227ENST00000498548 CASD1Q96PB1 797 aa18■□□□□ 0.47
NR1H3-227ENST00000498548 HSD17B14Q9BPX1 270 aa18■□□□□ 0.47
NR1H3-227ENST00000498548 FOXP1Q9H334 677 aaPredicted RBP18■□□□□ 0.47
NR1H3-227ENST00000498548 CWH43Q9H720 699 aa18■□□□□ 0.47
NR1H3-227ENST00000498548 COL4A3BPQ9Y5P4 624 aa18■□□□□ 0.47
NR1H3-227ENST00000498548 TNFRSF10AO00220 468 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 GTF2F1P35269 517 aaKnown RBP eCLIP17.99■□□□□ 0.47
NR1H3-227ENST00000498548 IRS1P35568 1242 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 RFC5P40937 340 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 TECP42680 631 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 EMC2Q15006 297 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 FAM43BQ6ZT52 329 aaPredicted RBP17.99■□□□□ 0.47
NR1H3-227ENST00000498548 CATSPER4Q7RTX7 472 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 PIGOQ8TEQ8 1089 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 P2RX5Q93086 422 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 LMAN2LQ9H0V9 348 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 IGFLR1Q9H665 355 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 IFT122Q9HBG6 1241 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
NR1H3-227ENST00000498548 PCDHGC5Q9Y5F6 944 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 XIRP2A4UGR9 3374 aa17.99■□□□□ 0.47
NR1H3-227ENST00000498548 A0A0U1RQF3 1178 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 H3BQ06 376 aaPredicted RBP17.98■□□□□ 0.47
NR1H3-227ENST00000498548 ATF7P17544 494 aaPredicted RBP17.98■□□□□ 0.47
NR1H3-227ENST00000498548 LAMTOR4Q0VGL1 99 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 CLLU1OSQ5K130 101 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 TTC38Q5R3I4 469 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 COLGALT1Q8NBJ5 622 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.98■□□□□ 0.47
NR1H3-227ENST00000498548 HELQQ8TDG4 1101 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 PSPC1Q8WXF1 523 aaKnown RBP17.98■□□□□ 0.47
NR1H3-227ENST00000498548 LPPQ93052 612 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 MTRQ99707 1265 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 INO80BQ9C086 356 aaPredicted RBP17.98■□□□□ 0.47
NR1H3-227ENST00000498548 TMEM117Q9H0C3 514 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 MINDY3Q9H8M7 445 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 XPNPEP1Q9NQW7 623 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 CLDND1Q9NY35 253 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 PIN4Q9Y237 131 aaKnown RBP17.98■□□□□ 0.47
NR1H3-227ENST00000498548 PCDHB12Q9Y5F1 795 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 BRWD1Q9NSI6 2320 aa17.98■□□□□ 0.47
NR1H3-227ENST00000498548 ST18O60284 1047 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 MED24O75448 989 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 SPATA31C1P0DKV0 1188 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 SFPQP23246 707 aaKnown RBP eCLIP17.97■□□□□ 0.47
NR1H3-227ENST00000498548 PBX3P40426 434 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 HYAL1Q12794 435 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 NAALADL2Q58DX5 795 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 TWF2Q6IBS0 349 aaKnown RBP17.97■□□□□ 0.47
NR1H3-227ENST00000498548 ADGRD2Q7Z7M1 963 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 ZNF598Q86UK7 904 aaKnown RBP17.97■□□□□ 0.47
NR1H3-227ENST00000498548 FERMT3Q86UX7 667 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 NOSTRINQ8IVI9 506 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 ABI1Q8IZP0 508 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 TMX3Q96JJ7 454 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 UPF2Q9HAU5 1272 aaKnown RBP17.97■□□□□ 0.47
NR1H3-227ENST00000498548 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 PPME1Q9Y570 386 aa17.97■□□□□ 0.47
NR1H3-227ENST00000498548 LINC01565O15544 149 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 LYPLA2O95372 231 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 OR52Z1P0C646 297 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 PHKA2P46019 1235 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 MAEAQ7L5Y9 396 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 CATSPER3Q86XQ3 398 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 EXOC8Q8IYI6 725 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 THNSL1Q8IYQ7 743 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 RNF149Q8NC42 400 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 NEK9Q8TD19 979 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 TCP11Q8WWU5 503 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 PABPC5Q96DU9 382 aaKnown RBP17.96■□□□□ 0.47
NR1H3-227ENST00000498548 CHST12Q9NRB3 414 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 AAASQ9NRG9 546 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 ANKEF1Q9NU02 776 aa17.96■□□□□ 0.47
NR1H3-227ENST00000498548 MEIS3P2A8K0S8 358 aa17.95■□□□□ 0.46
NR1H3-227ENST00000498548 HOXA2O43364 376 aa17.95■□□□□ 0.46
NR1H3-227ENST00000498548 FGF18O76093 207 aa17.95■□□□□ 0.46
NR1H3-227ENST00000498548 EOMESO95936 686 aa17.95■□□□□ 0.46
NR1H3-227ENST00000498548 RARRES1P49788 294 aa17.95■□□□□ 0.46
NR1H3-227ENST00000498548 TOB1P50616 345 aaPredicted RBP17.95■□□□□ 0.46
NR1H3-227ENST00000498548 DLX2Q07687 328 aaPredicted RBP17.95■□□□□ 0.46
NR1H3-227ENST00000498548 LEXMQ3ZCV2 418 aa17.95■□□□□ 0.46
NR1H3-227ENST00000498548 SRGAP1Q7Z6B7 1085 aa17.95■□□□□ 0.46
NR1H3-227ENST00000498548 RBM23Q86U06 439 aaKnown RBP17.95■□□□□ 0.46
NR1H3-227ENST00000498548 C4orf32Q8N8J7 132 aa17.95■□□□□ 0.46
NR1H3-227ENST00000498548 ASAP3Q8TDY4 903 aa17.95■□□□□ 0.46
NR1H3-227ENST00000498548 MICAL1Q8TDZ2 1067 aa17.95■□□□□ 0.46
NR1H3-227ENST00000498548 CCDC43Q96MW1 224 aaKnown RBP17.95■□□□□ 0.46
NR1H3-227ENST00000498548 NOL7Q9UMY1 257 aaKnown RBP17.95■□□□□ 0.46
NR1H3-227ENST00000498548 ASAP2O43150 1006 aa17.94■□□□□ 0.46
NR1H3-227ENST00000498548 USO1O60763 962 aaKnown RBP17.94■□□□□ 0.46
NR1H3-227ENST00000498548 IL9P15248 144 aa17.94■□□□□ 0.46
NR1H3-227ENST00000498548 LAG3P18627 525 aa17.94■□□□□ 0.46
NR1H3-227ENST00000498548 U2AF2P26368 475 aaKnown RBP eCLIP17.94■□□□□ 0.46
NR1H3-227ENST00000498548 LTBRP36941 435 aa17.94■□□□□ 0.46
NR1H3-227ENST00000498548 ERVFC1P60507 584 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms