RNA–Protein interactions for RNA: ENST00000498457.1

AC078788.1-201, humanhuman

TSL 3 BASIC

Gene AC078788.1, Length 634 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078788.1-201ENST00000498457 SPICE1Q8N0Z3 855 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 GPC2Q8N158 579 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 CCAR2Q8N163 923 aaKnown RBP7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 TMEM130Q8N3G9 435 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 GLIS3Q8NEA6 775 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 CHURC1Q8WUH1 139 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 TMEM174Q8WUU8 243 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 NELFBQ8WX92 580 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 JDP2Q8WYK2 163 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 DHTKD1Q96HY7 919 aaPredicted RBP7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 WNK4Q96J92 1243 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 LPIN3Q9BQK8 851 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 POLR3CQ9BUI4 534 aaPredicted RBP7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 GTPBP4Q9BZE4 634 aaKnown RBP7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 KCTD10Q9H3F6 313 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 THAP9Q9H5L6 903 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 RMND1Q9NWS8 449 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 MAP3K20Q9NYL2 800 aaKnown RBP7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 PPP1R9AQ9ULJ8 1098 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 RAXQ9Y2V3 346 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 PPP2R3BQ9Y5P8 575 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 UBIAD1Q9Y5Z9 338 aa7.53□□□□□ -1.2
AC078788.1-201ENST00000498457 DOCK5Q9H7D0 1870 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 A0A1W2PQC6 194 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 CBFA2T2O43439 604 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 ALX3O95076 343 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 PTPRAP18433 802 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 VCAM1P19320 739 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 ZNF131P52739 623 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 COPB1P53618 953 aaKnown RBP7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 STX17P56962 302 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 PSMC6P62333 389 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 MRPS9P82933 396 aaKnown RBP7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 ATP2B2Q01814 1243 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 PSMD2Q13200 908 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 DHX8Q14562 1220 aaKnown RBP7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 PCSK7Q16549 785 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 BMT2Q1RMZ1 405 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 SPECC1LQ69YQ0 1117 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 ANKRD40Q6AI12 368 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 CATSPER3Q86XQ3 398 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 SLFN12Q8IYM2 578 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 SCYL3Q8IZE3 742 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 SYT2Q8N9I0 419 aaPredicted RBP7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 P2RX5Q93086 422 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 GSX2Q9BZM3 304 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 PHACTR1Q9C0D0 580 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 SH2D4AQ9H788 454 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 VEZTQ9HBM0 779 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 WRAP73Q9P2S5 460 aaPredicted RBP7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 ZNF214Q9UL59 606 aaPredicted RBP7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 PCDHA12Q9UN75 941 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 SCAF8Q9UPN6 1271 aaKnown RBP7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 CTNND2Q9UQB3 1225 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 BCS1LQ9Y276 419 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 PFASO15067 1338 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 MYPNQ86TC9 1320 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 KDM3AQ9Y4C1 1321 aa7.52□□□□□ -1.21
AC078788.1-201ENST00000498457 MYH11P35749 1972 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 ZMYM2Q9UBW7 1377 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 LGALS16A8MUM7 142 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 E9PMD0 336 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 NFIBO00712 420 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 CTIFO43310 598 aaKnown RBP7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 STX10O60499 249 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 USP2O75604 605 aaPredicted RBP7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 SLITRK3O94933 977 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 STBD1O95210 358 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 LYPLA2O95372 231 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 SKILP12757 684 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 CPB1P15086 417 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 ITGB5P18084 799 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 LMNB1P20700 586 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 EEF1GP26641 437 aaKnown RBP7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 HOXA13P31271 388 aaPredicted RBP7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 HNRNPH3P31942 346 aaKnown RBP7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 GRIK1P39086 918 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 STAT3P40763 770 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 PPP1R2P41236 205 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 EPS15P42566 896 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 FXR1P51114 621 aaKnown RBP eCLIP7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 BACE1P56817 501 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 COASYQ13057 564 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 TRAF1Q13077 416 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 SPP2Q13103 211 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 MAPK7Q13164 816 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 MOGSQ13724 837 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 GIT2Q14161 759 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 MEA1Q16626 185 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 NFIL3Q16649 462 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 PTPN21Q16825 1174 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 TBC1D10BQ4KMP7 808 aaPredicted RBP7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 MUM1L1Q5H9M0 696 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 FIGNQ5HY92 759 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 SV2BQ7L1I2 683 aa7.51□□□□□ -1.21
AC078788.1-201ENST00000498457 APOBEC3FQ8IUX4 373 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms