RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 JPH2Q9BR39 696 aaPredicted RBP13.21□□□□□ -0.29
NUDCD3-211ENST00000497978 PHF20Q9BVI0 1012 aa13.21□□□□□ -0.29
NUDCD3-211ENST00000497978 INO80BQ9C086 356 aaPredicted RBP13.21□□□□□ -0.29
NUDCD3-211ENST00000497978 TLE6Q9H808 572 aa13.21□□□□□ -0.29
NUDCD3-211ENST00000497978 PUF60Q9UHX1 559 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-211ENST00000497978 FAM86C2PA6NEL3 165 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 DCXO43602 365 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 MARCH6O60337 910 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 PFKFB2O60825 505 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 EOMESO95936 686 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 ANAPC15P60006 121 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 KRT17Q04695 432 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 PPP4R3AQ6IN85 833 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 B3GNT9Q6UX72 402 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 LRRC43Q8N309 656 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 FAM122AQ96E09 287 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 CASD1Q96PB1 797 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 CDCA3Q99618 268 aaPredicted RBP13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 CWH43Q9H720 699 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 CHST12Q9NRB3 414 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 LZTS1Q9Y250 596 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 PLXNA4Q9HCM2 1894 aa13.2□□□□□ -0.3
NUDCD3-211ENST00000497978 IGKV6-21A0A0C4DH24 114 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 A0A0U1RQF3 1178 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 SLC37A4O43826 429 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 CCNT1O60563 726 aaKnown RBP13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 MAFO75444 373 aaPredicted RBP13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 EYA4O95677 639 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 FGFR4P22455 802 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 PPM1AP35813 382 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 QARSP47897 775 aaKnown RBP13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 PLCB3Q01970 1234 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 COASYQ13057 564 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 PPP2R5CQ13362 524 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 PIK3AP1Q6ZUJ8 805 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 ZNF410Q86VK4 478 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 RHPN2Q8IUC4 686 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 EXOC8Q8IYI6 725 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 MRPS27Q92552 414 aaKnown RBP13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 MS4A3Q96HJ5 214 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 MSLNLQ96KJ4 702 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 ZNF558Q96NG5 402 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 C11orf16Q9NQ32 467 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 PPP4R2Q9NY27 417 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 SUCLA2Q9P2R7 463 aaPredicted RBP13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 HCSTQ9UBK5 93 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 TPCN1Q9ULQ1 816 aa13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
NUDCD3-211ENST00000497978 A0A087WZ62 844 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 TMEM150BA6NC51 233 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 PRR33A8MZF0 331 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 PER2O15055 1255 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 TBX3O15119 743 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 STBD1O95210 358 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 BAG4O95429 457 aaKnown RBP13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 P4HBP07237 508 aaKnown RBP13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 SKIP12755 728 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 PLA2G5P39877 138 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 ERVFC1P60507 584 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 DRP2Q13474 957 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 KCNT2Q6UVM3 1135 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 LRRC55Q6ZSA7 311 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 ANO5Q75V66 913 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 SMRP1Q8NCR6 262 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 SLC7A3Q8WY07 619 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 CEP89Q96ST8 783 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 SH2D3AQ9BRG2 576 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 FDXACB1Q9BRP7 624 aaPredicted RBP13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 MRPL9Q9BYD2 267 aaKnown RBP13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 KCNMB3Q9NPA1 279 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 ENTPD7Q9NQZ7 604 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 CYP26B1Q9NR63 512 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 RNF19AQ9NV58 838 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 SPG21Q9NZD8 308 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 ORC3Q9UBD5 711 aaPredicted RBP13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 PPME1Q9Y570 386 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 PCDHGC5Q9Y5F6 944 aa13.18□□□□□ -0.3
NUDCD3-211ENST00000497978 EML1O00423 815 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 FSCN2O14926 492 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 CSDE1O75534 798 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 AK2P54819 239 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 BMS1Q14692 1282 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 DUSP6Q16828 381 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 PLPP4Q5VZY2 271 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 PLA2G4FQ68DD2 849 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 TWF2Q6IBS0 349 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 OTUD6AQ7L8S5 288 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 SLFN12Q8IYM2 578 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 NLRP4Q96MN2 994 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 TCF25Q9BQ70 676 aa13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 NGRNQ9NPE2 291 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 VAV3Q9UKW4 847 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms