RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 DBR1Q9UK59 544 aaKnown RBP12.54□□□□□ -0.4
ERCC8-208ENST00000497892 GINS2Q9Y248 185 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 CHD9Q3L8U1 2897 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 VWA3AA6NCI4 1184 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 PP2D1A8MPX8 630 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 DNAJB2P25686 324 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 CCT6AP40227 531 aaKnown RBP12.53□□□□□ -0.4
ERCC8-208ENST00000497892 NLRP11P59045 1033 aaKnown RBP12.53□□□□□ -0.4
ERCC8-208ENST00000497892 SF3A1Q15459 793 aaKnown RBP12.53□□□□□ -0.4
ERCC8-208ENST00000497892 RAB30Q15771 203 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 FAM173BQ6P4H8 233 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 FAM43BQ6ZT52 329 aaPredicted RBP12.53□□□□□ -0.4
ERCC8-208ENST00000497892 SNX29Q8TEQ0 813 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 CCDC43Q96MW1 224 aaKnown RBP12.53□□□□□ -0.4
ERCC8-208ENST00000497892 NACC1Q96RE7 527 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 PPP1R16BQ96T49 567 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 XPNPEP1Q9NQW7 623 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 SUCLA2Q9P2R7 463 aaPredicted RBP12.53□□□□□ -0.4
ERCC8-208ENST00000497892 PADI3Q9ULW8 664 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 NOC2LQ9Y3T9 749 aaKnown RBP12.53□□□□□ -0.4
ERCC8-208ENST00000497892 COL4A6Q14031 1691 aa12.53□□□□□ -0.4
ERCC8-208ENST00000497892 TMEM265A0A087WTH1 108 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.52□□□□□ -0.41
ERCC8-208ENST00000497892 RPS6KA5O75582 802 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 DGAT1O75907 488 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 AMHP03971 560 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 CDC42EP1Q00587 391 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 PTPAQ15257 358 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 ECM1Q16610 540 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 KRT79Q5XKE5 535 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
ERCC8-208ENST00000497892 ZNF410Q86VK4 478 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 FAM228AQ86W67 206 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 TCP11Q8WWU5 503 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 PSPC1Q8WXF1 523 aaKnown RBP12.52□□□□□ -0.41
ERCC8-208ENST00000497892 AK8Q96MA6 479 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 MTRQ99707 1265 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 MMTAG2Q9BU76 263 aaKnown RBP12.52□□□□□ -0.41
ERCC8-208ENST00000497892 FTHL17Q9BXU8 183 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 ERVK-5Q9HDB9 667 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 PCDHA11Q9Y5I1 949 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 CLIC4Q9Y696 253 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 TTC3P53804 2025 aa12.52□□□□□ -0.41
ERCC8-208ENST00000497892 A0A087WWV3 80 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 GJB5O95377 273 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 ZSCAN22P10073 491 aaPredicted RBP12.51□□□□□ -0.41
ERCC8-208ENST00000497892 DARSP14868 501 aaKnown RBP12.51□□□□□ -0.41
ERCC8-208ENST00000497892 EIF4BP23588 611 aaKnown RBP12.51□□□□□ -0.41
ERCC8-208ENST00000497892 CDC25AP30304 524 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 RABGGTBP53611 331 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 ODR4Q5SWX8 454 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 TMCO2Q7Z6W1 182 aaPredicted RBP12.51□□□□□ -0.41
ERCC8-208ENST00000497892 RHPN2Q8IUC4 686 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 PRPF31Q8WWY3 499 aaKnown RBP12.51□□□□□ -0.41
ERCC8-208ENST00000497892 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 LINC01599Q8WXQ3 324 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 TMEM143Q96AN5 459 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 TIFAQ96CG3 184 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 SCLT1Q96NL6 688 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 USP28Q96RU2 1077 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 TMX1Q9H3N1 280 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 DDX19AQ9NUU7 478 aaKnown RBP12.51□□□□□ -0.41
ERCC8-208ENST00000497892 MSRAQ9UJ68 235 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 ST3GAL5Q9UNP4 418 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 KIAA1024Q9UPX6 916 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 YBX2Q9Y2T7 364 aaKnown RBP12.51□□□□□ -0.41
ERCC8-208ENST00000497892 COL4A3BPQ9Y5P4 624 aa12.51□□□□□ -0.41
ERCC8-208ENST00000497892 MORC2Q9Y6X9 1032 aaPredicted RBP12.51□□□□□ -0.41
ERCC8-208ENST00000497892 A0A087WZ62 844 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 GPR182O15218 404 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 SLC26A4O43511 780 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 USO1O60763 962 aaKnown RBP12.5□□□□□ -0.41
ERCC8-208ENST00000497892 F13A1P00488 732 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
ERCC8-208ENST00000497892 GRIN1Q05586 938 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 LAMTOR4Q0VGL1 99 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 NFX1Q12986 1120 aaKnown RBP12.5□□□□□ -0.41
ERCC8-208ENST00000497892 PKP1Q13835 747 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 BECN1Q14457 450 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 HYIQ5T013 277 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 ZNF697Q5TEC3 545 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 KSR1Q8IVT5 923 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 MYOCDQ8IZQ8 938 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 KCTD17Q8N5Z5 321 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 MCPH1Q8NEM0 835 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 ZNF668Q96K58 619 aaPredicted RBP12.5□□□□□ -0.41
ERCC8-208ENST00000497892 NLRP4Q96MN2 994 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 FDXACB1Q9BRP7 624 aaPredicted RBP12.5□□□□□ -0.41
ERCC8-208ENST00000497892 BHMT2Q9H2M3 363 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 TTYH1Q9H313 450 aaPredicted RBP12.5□□□□□ -0.41
ERCC8-208ENST00000497892 IFT122Q9HBG6 1241 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 FBXO2Q9UK22 296 aaPredicted RBP12.5□□□□□ -0.41
ERCC8-208ENST00000497892 CHD7Q9P2D1 2997 aa12.5□□□□□ -0.41
ERCC8-208ENST00000497892 ARHGEF35A5YM69 484 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 ENPP3O14638 875 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 ASAP2O43150 1006 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 TLL1O43897 1013 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 CA3P07451 260 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms