RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 UCHL3P15374 230 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 GSTT1P30711 240 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 CALCOCO2Q13137 446 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 MPP2Q14168 576 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 NONOQ15233 471 aaKnown RBP eCLIP14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 KIAA0825Q8IV33 1275 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 ASAP3Q8TDY4 903 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 POP1Q99575 1024 aaKnown RBP14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 GPR75-ASB3A0A0A6YYF3 556 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 IL2RBP14784 551 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 SNX30Q5VWJ9 437 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 PNMA1Q8ND90 353 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 SLC35G2Q8TBE7 412 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 TBCKQ8TEA7 893 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 CTNNBL1Q8WYA6 563 aaPredicted RBP14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 SYN2Q92777 582 aaPredicted RBP14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 MOV10L1Q9BXT6 1211 aaKnown RBP14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 SLCO1B3Q9NPD5 702 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 ASB3Q9Y575 518 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 PNPLA7Q6ZV29 1317 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 O00370 1275 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 GJB6O95452 261 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 SKIP12755 728 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 COASYQ13057 564 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 DCAF12L1Q5VU92 463 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 FOXB2Q5VYV0 432 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 RFWD3Q6PCD5 774 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 NDNQ99608 321 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 TXLNGYQ9BZA5 131 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 TAOK3Q9H2K8 898 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 TMEM260Q9NX78 707 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 GSTTP1A0A1W2PQM5 241 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 CES2O00748 559 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 TPP2P29144 1249 aaPredicted RBP14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 DEUP1Q05D60 604 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 RBM26Q5T8P6 1007 aaKnown RBP14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 VSTM1Q6UX27 236 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 CAPN12Q6ZSI9 719 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 ANKLE1Q8NAG6 615 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 RBBP8NLQ8NC74 664 aaPredicted RBP14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 SCG3Q8WXD2 468 aaKnown RBP14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 MTA3Q9BTC8 594 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 AIPL1Q9NZN9 384 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 STOML1Q9UBI4 398 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 HDAC9Q9UKV0 1011 aa14.05□□□□□ -0.16
GAPVD1-220ENST00000497580 PCDH11XQ9BZA7 1347 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 PCDH11YQ9BZA8 1340 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 KRT36O76013 467 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 ECEL1O95672 775 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 NR2F2P24468 414 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 LBRQ14739 615 aaKnown RBP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 CALCRLQ16602 461 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 KRT79Q5XKE5 535 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 CCDC137Q6PK04 289 aaKnown RBP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 IRF2BP2Q7Z5L9 587 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 PIGBQ92521 554 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 ZNF512BQ96KM6 892 aaPredicted RBP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 AK8Q96MA6 479 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 CDC42EP4Q9H3Q1 356 aaKnown RBP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 ASIC3Q9UHC3 531 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 ARFGEF2Q9Y6D5 1785 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 SMCO2A6NFE2 343 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 FAM196BA6NMK8 535 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 TFAP4Q01664 338 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 KYNUQ16719 465 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 KHDC1Q4VXA5 237 aaKnown RBP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 NEK8Q86SG6 692 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.04□□□□□ -0.163e-7■■■■■ 243.7
GAPVD1-220ENST00000497580 AGGF1Q8N302 714 aaeCLIP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 CKAP2Q8WWK9 683 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 PWWP2AQ96N64 755 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 CAPN9O14815 690 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 PFDN1O60925 122 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 ACADSP16219 412 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 MARCKSL1P49006 195 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 DYNC1I2Q13409 638 aaKnown RBP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 TMEM266Q2M3C6 531 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 CGB2Q6NT52 195 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 RASGEF1CQ8N431 466 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 PPFIBP2Q8ND30 876 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 RBM46Q8TBY0 533 aaKnown RBP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 ALG3Q92685 438 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 GANQ9H2C0 597 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 CCDC134Q9H6E4 229 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 PREBQ9HCU5 417 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 RIC8AQ9NPQ8 531 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 BMP2KQ9NSY1 1161 aaPredicted RBP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 TFCP2L1Q9NZI6 479 aa14.04□□□□□ -0.16
GAPVD1-220ENST00000497580 IGSF9BQ9UPX0 1349 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 DDX3XO00571 662 aaKnown RBP eCLIP14.03□□□□□ -0.165e-8■■□□□ 13.6
GAPVD1-220ENST00000497580 GNAQP50148 359 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 CCNG1P51959 295 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 POU5F1Q01860 360 aaKnown RBP14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 TMED2Q15363 201 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 SCYL3Q8IZE3 742 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 ZFAND2BQ8WV99 257 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 GRHL1Q9NZI5 618 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms