RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 MICALL1Q8N3F8 863 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 ERMNQ8TAM6 284 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 PIGOQ8TEQ8 1089 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 NLRP4Q96MN2 994 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 PRDM6Q9NQX0 595 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 BMP2KQ9NSY1 1161 aaPredicted RBP20.83■□□□□ 0.93
RPN1-208ENST00000497415 PRPHP41219 470 aa20.82■□□□□ 0.92
RPN1-208ENST00000497415 GATMP50440 423 aa20.82■□□□□ 0.92
RPN1-208ENST00000497415 SRGAP1Q7Z6B7 1085 aa20.82■□□□□ 0.92
RPN1-208ENST00000497415 IGSF22Q8N9C0 903 aa20.82■□□□□ 0.92
RPN1-208ENST00000497415 NACC1Q96RE7 527 aa20.82■□□□□ 0.92
RPN1-208ENST00000497415 TRAIPQ9BWF2 469 aa20.82■□□□□ 0.92
RPN1-208ENST00000497415 ATP6V0A4Q9HBG4 840 aa20.82■□□□□ 0.92
RPN1-208ENST00000497415 DBR1Q9UK59 544 aaKnown RBP20.82■□□□□ 0.92
RPN1-208ENST00000497415 MRPL42Q9Y6G3 142 aaKnown RBP20.82■□□□□ 0.92
RPN1-208ENST00000497415 A0A087WWV3 80 aa20.81■□□□□ 0.92
RPN1-208ENST00000497415 A0A0U1RQF3 1178 aa20.81■□□□□ 0.92
RPN1-208ENST00000497415 CTNNB1P35222 781 aa20.81■□□□□ 0.92
RPN1-208ENST00000497415 POU5F1BQ06416 359 aa20.81■□□□□ 0.92
RPN1-208ENST00000497415 MXD4Q14582 209 aaPredicted RBP20.81■□□□□ 0.92
RPN1-208ENST00000497415 FAM102BQ5T8I3 360 aa20.81■□□□□ 0.92
RPN1-208ENST00000497415 ECHDC2Q86YB7 292 aa20.81■□□□□ 0.92
RPN1-208ENST00000497415 PLVAPQ9BX97 442 aa20.81■□□□□ 0.92
RPN1-208ENST00000497415 DACT1Q9NYF0 836 aa20.81■□□□□ 0.92
RPN1-208ENST00000497415 SRGAP2CP0DJJ0 459 aa20.8■□□□□ 0.92
RPN1-208ENST00000497415 ARL2P36404 184 aa20.8■□□□□ 0.92
RPN1-208ENST00000497415 PAN2Q504Q3 1202 aaKnown RBP20.8■□□□□ 0.92
RPN1-208ENST00000497415 HAUS3Q68CZ6 603 aa20.8■□□□□ 0.92
RPN1-208ENST00000497415 ZNF598Q86UK7 904 aaKnown RBP20.8■□□□□ 0.92
RPN1-208ENST00000497415 P2RX5Q93086 422 aa20.8■□□□□ 0.92
RPN1-208ENST00000497415 MRPL38Q96DV4 380 aaKnown RBP20.8■□□□□ 0.92
RPN1-208ENST00000497415 CCDC43Q96MW1 224 aaKnown RBP20.8■□□□□ 0.92
RPN1-208ENST00000497415 MINDY3Q9H8M7 445 aa20.8■□□□□ 0.92
RPN1-208ENST00000497415 RNF19AQ9NV58 838 aa20.8■□□□□ 0.92
RPN1-208ENST00000497415 LRWD1Q9UFC0 647 aa20.8■□□□□ 0.92
RPN1-208ENST00000497415 STK24Q9Y6E0 443 aa20.8■□□□□ 0.92
RPN1-208ENST00000497415 REV3LO60673 3130 aa20.8■□□□□ 0.92
RPN1-208ENST00000497415 TBKBP1A7MCY6 615 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 HOXA2O43364 376 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 EOMESO95936 686 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 FGFR1P11362 822 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 IBSPP21815 317 aaPredicted RBP20.79■□□□□ 0.92
RPN1-208ENST00000497415 ATP2C1P98194 919 aaPredicted RBP20.79■□□□□ 0.92
RPN1-208ENST00000497415 IL17AQ16552 155 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 PTPROQ16827 1216 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 NAALADL2Q58DX5 795 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 POTEGQ6S5H5 508 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 CATSPER4Q7RTX7 472 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 IFNLR1Q8IU57 520 aaPredicted RBP20.79■□□□□ 0.92
RPN1-208ENST00000497415 RNF149Q8NC42 400 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 C11orf84Q9BUA3 381 aaPredicted RBP20.79■□□□□ 0.92
RPN1-208ENST00000497415 RAB34Q9BZG1 259 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 TMEM117Q9H0C3 514 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 THEGQ9P2T0 379 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 UNC80Q8N2C7 3258 aa20.79■□□□□ 0.92
RPN1-208ENST00000497415 ATF7P17544 494 aaPredicted RBP20.78■□□□□ 0.92
RPN1-208ENST00000497415 CCT6AP40227 531 aaKnown RBP20.78■□□□□ 0.92
RPN1-208ENST00000497415 PTENP60484 403 aa20.78■□□□□ 0.92
RPN1-208ENST00000497415 ECM1Q16610 540 aa20.78■□□□□ 0.92
RPN1-208ENST00000497415 DTHD1Q6ZMT9 781 aa20.78■□□□□ 0.92
RPN1-208ENST00000497415 ASAP3Q8TDY4 903 aa20.78■□□□□ 0.92
RPN1-208ENST00000497415 ATXN2LQ8WWM7 1075 aaKnown RBP20.78■□□□□ 0.92
RPN1-208ENST00000497415 INTS4Q96HW7 963 aaKnown RBP20.78■□□□□ 0.92
RPN1-208ENST00000497415 LMAN2LQ9H0V9 348 aa20.78■□□□□ 0.92
RPN1-208ENST00000497415 AGPAT5Q9NUQ2 364 aa20.78■□□□□ 0.92
RPN1-208ENST00000497415 PIN4Q9Y237 131 aaKnown RBP20.78■□□□□ 0.92
RPN1-208ENST00000497415 ATG2AQ2TAZ0 1938 aa20.78■□□□□ 0.92
RPN1-208ENST00000497415 USO1O60763 962 aaKnown RBP20.77■□□□□ 0.92
RPN1-208ENST00000497415 GLRA2P23416 452 aa20.77■□□□□ 0.92
RPN1-208ENST00000497415 PHKA2P46019 1235 aa20.77■□□□□ 0.92
RPN1-208ENST00000497415 TFDP1Q14186 410 aa20.77■□□□□ 0.92
RPN1-208ENST00000497415 PCBP1Q15365 356 aaKnown RBP eCLIP20.77■□□□□ 0.921e-6■■□□□ 13.9
RPN1-208ENST00000497415 MCPH1Q8NEM0 835 aa20.77■□□□□ 0.92
RPN1-208ENST00000497415 CASD1Q96PB1 797 aa20.77■□□□□ 0.92
RPN1-208ENST00000497415 PLAGL2Q9UPG8 496 aa20.77■□□□□ 0.92
RPN1-208ENST00000497415 K7ELQ4 463 aaPredicted RBP20.76■□□□□ 0.91
RPN1-208ENST00000497415 GRM6O15303 877 aa20.76■□□□□ 0.91
RPN1-208ENST00000497415 ZNF623O75123 536 aa20.76■□□□□ 0.91
RPN1-208ENST00000497415 SKIP12755 728 aa20.76■□□□□ 0.91
RPN1-208ENST00000497415 PDCP20941 246 aa20.76■□□□□ 0.91
RPN1-208ENST00000497415 HOXA11P31270 313 aaPredicted RBP20.76■□□□□ 0.91
RPN1-208ENST00000497415 CAPSQ13938 189 aa20.76■□□□□ 0.91
RPN1-208ENST00000497415 TWF2Q6IBS0 349 aaKnown RBP20.76■□□□□ 0.91
RPN1-208ENST00000497415 BRAPQ7Z569 592 aa20.76■□□□□ 0.91
RPN1-208ENST00000497415 NFKBIZQ9BYH8 718 aa20.76■□□□□ 0.91
RPN1-208ENST00000497415 POLR3FQ9H1D9 316 aaPredicted RBP20.76■□□□□ 0.91
RPN1-208ENST00000497415 CWH43Q9H720 699 aa20.76■□□□□ 0.91
RPN1-208ENST00000497415 TYW1Q9NV66 732 aaKnown RBP20.76■□□□□ 0.91
RPN1-208ENST00000497415 COG5Q9UP83 839 aa20.76■□□□□ 0.91
RPN1-208ENST00000497415 CYP11B2P19099 503 aa20.75■□□□□ 0.91
RPN1-208ENST00000497415 RAB27AP51159 221 aa20.75■□□□□ 0.91
RPN1-208ENST00000497415 SKIV2LQ15477 1246 aaKnown RBP20.75■□□□□ 0.91
RPN1-208ENST00000497415 TIGD5Q53EQ6 642 aa20.75■□□□□ 0.91
RPN1-208ENST00000497415 CLLU1OSQ5K130 101 aa20.75■□□□□ 0.91
RPN1-208ENST00000497415 ARL6IP4Q66PJ3 421 aaKnown RBP20.75■□□□□ 0.91
RPN1-208ENST00000497415 PADI6Q6TGC4 694 aa20.75■□□□□ 0.91
RPN1-208ENST00000497415 LRRC55Q6ZSA7 311 aa20.75■□□□□ 0.91
RPN1-208ENST00000497415 SNX29Q8TEQ0 813 aa20.75■□□□□ 0.91
RPN1-208ENST00000497415 SNX21Q969T3 373 aa20.75■□□□□ 0.91
RPN1-208ENST00000497415 GPRC5CQ9NQ84 441 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms