RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 HOXA13P31271 388 aaPredicted RBP6.4□□□□□ -1.38
UBE3C-208ENST00000497368 SOX18P35713 384 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 NT5C2P49902 561 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 DEFB103AP81534 67 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 ZNF200P98182 395 aaPredicted RBP6.4□□□□□ -1.38
UBE3C-208ENST00000497368 PGM5Q15124 567 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 IMMTQ16891 758 aaKnown RBP6.4□□□□□ -1.38
UBE3C-208ENST00000497368 HSDL1Q3SXM5 330 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 TTC39BQ5VTQ0 682 aaPredicted RBP6.4□□□□□ -1.38
UBE3C-208ENST00000497368 KRT40Q6A162 431 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 NFRKBQ6P4R8 1299 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 FBXO11Q86XK2 927 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 IGDCC4Q8TDY8 1250 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 MAP4K1Q92918 833 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 PLD4Q96BZ4 506 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 AP5M1Q9H0R1 490 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 KAT14Q9H8E8 782 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 SPC25Q9HBM1 224 aa6.4□□□□□ -1.38
UBE3C-208ENST00000497368 RBM8AQ9Y5S9 174 aaKnown RBP6.4□□□□□ -1.38
UBE3C-208ENST00000497368 ARID2Q68CP9 1835 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 FNDC1Q4ZHG4 1894 aaPredicted RBP6.39□□□□□ -1.39
UBE3C-208ENST00000497368 RFXAPO00287 272 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 HIP1O00291 1037 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 ZBTB5O15062 677 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 NKRFO15226 690 aaKnown RBP eCLIP6.39□□□□□ -1.39
UBE3C-208ENST00000497368 TLR3O15455 904 aaKnown RBP6.39□□□□□ -1.39
UBE3C-208ENST00000497368 SORBS3O60504 671 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 CXCL10P02778 98 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 IQCF3P0C7M6 154 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 TXNP10599 105 aaKnown RBP6.39□□□□□ -1.39
UBE3C-208ENST00000497368 RXRAP19793 462 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 CPT1AP50416 773 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 MFAP1P55081 439 aaKnown RBP6.39□□□□□ -1.39
UBE3C-208ENST00000497368 IFIT1BQ5T764 474 aaKnown RBP6.39□□□□□ -1.39
UBE3C-208ENST00000497368 SEPT14Q6ZU15 432 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 NOL8Q76FK4 1167 aaKnown RBP6.39□□□□□ -1.39
UBE3C-208ENST00000497368 ZNF438Q7Z4V0 828 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 IQCA1Q86XH1 822 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 RAB11FIP4Q86YS3 637 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 TMEM199Q8N511 208 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 RMDN3Q96TC7 470 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 C16orf70Q9BSU1 422 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 KRT23Q9C075 422 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 VAT1LQ9HCJ6 419 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 ABI2Q9NYB9 513 aaPredicted RBP6.39□□□□□ -1.39
UBE3C-208ENST00000497368 HDAC6Q9UBN7 1215 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 POLIQ9UNA4 740 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 TRIOO75962 3097 aa6.39□□□□□ -1.39
UBE3C-208ENST00000497368 KAT6AQ92794 2004 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 NCOR1O75376 2440 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 MEIS2O14770 477 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 SLC27A2O14975 620 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 CFBP00751 764 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 GH1P01241 217 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 CA3P07451 260 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 LINC00271P0C7V0 271 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 NPR3P17342 541 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 WDR5P61964 334 aaKnown RBP6.38□□□□□ -1.39
UBE3C-208ENST00000497368 RAC1P63000 192 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 ADAM17P78536 824 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 ATP11AP98196 1134 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 TAP1Q03518 808 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 PTPN11Q06124 597 aaPredicted RBP6.38□□□□□ -1.39
UBE3C-208ENST00000497368 NECTIN1Q15223 517 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 C8orf34Q49A92 452 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 SHISA2Q6UWI4 295 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 DEFB128Q7Z7B8 93 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 VSIG10LQ86VR7 867 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 HOMER1Q86YM7 354 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 WFDC8Q8IUA0 241 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 ZNF654Q8IZM8 581 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 FMR1NBQ8N0W7 255 aaPredicted RBP6.38□□□□□ -1.39
UBE3C-208ENST00000497368 SRBD1Q8N5C6 995 aaKnown RBP6.38□□□□□ -1.39
UBE3C-208ENST00000497368 PPTC7Q8NI37 304 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 NSUN6Q8TEA1 469 aaKnown RBP6.38□□□□□ -1.39
UBE3C-208ENST00000497368 TTC9Q92623 222 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 INPP4AQ96PE3 977 aaPredicted RBP6.38□□□□□ -1.39
UBE3C-208ENST00000497368 IWS1Q96ST2 819 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 SPZ1Q9BXG8 430 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 AMNQ9BXJ7 453 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 LRRC2Q9BYS8 371 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 MAF1Q9H063 256 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 CNNM2Q9H8M5 875 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 CNTN3Q9P232 1028 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 TRIM33Q9UPN9 1127 aa6.38□□□□□ -1.39
UBE3C-208ENST00000497368 TTC3P53804 2025 aa6.37□□□□□ -1.39
UBE3C-208ENST00000497368 EVPLQ92817 2033 aa6.37□□□□□ -1.39
UBE3C-208ENST00000497368 NID2Q14112 1375 aa6.37□□□□□ -1.39
UBE3C-208ENST00000497368 hCG_1642624A0A1W2PR95 340 aa6.37□□□□□ -1.39
UBE3C-208ENST00000497368 IFIT3O14879 490 aaKnown RBP6.37□□□□□ -1.39
UBE3C-208ENST00000497368 EIF3JO75822 258 aaKnown RBP6.37□□□□□ -1.39
UBE3C-208ENST00000497368 FAM13AO94988 1023 aa6.37□□□□□ -1.39
UBE3C-208ENST00000497368 GGPS1O95749 300 aa6.37□□□□□ -1.39
UBE3C-208ENST00000497368 FGBP02675 491 aa6.37□□□□□ -1.39
UBE3C-208ENST00000497368 LGALS2P05162 132 aa6.37□□□□□ -1.39
UBE3C-208ENST00000497368 CKBP12277 381 aa6.37□□□□□ -1.39
UBE3C-208ENST00000497368 MZF1P28698 734 aaPredicted RBP6.37□□□□□ -1.39
UBE3C-208ENST00000497368 ICAM3P32942 547 aa6.37□□□□□ -1.39
UBE3C-208ENST00000497368 SERPINB4P48594 390 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms