RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 RFX8Q6ZV50 586 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 EPM2AIP1Q7L775 607 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 ZNF572Q7Z3I7 529 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 SRRM1Q8IYB3 904 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 UBL4BQ8N7F7 174 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 SUN5Q8TC36 379 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 MYLK2Q9H1R3 596 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 BMP2KQ9NSY1 1161 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 TYW1Q9NV66 732 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 SEC63Q9UGP8 760 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 RABGEF1Q9UJ41 708 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 ZMYND8Q9ULU4 1186 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 REXO2Q9Y3B8 237 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 JCADQ9P266 1359 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 CLTCQ00610 1675 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 PODXLO00592 558 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 TTI1O43156 1089 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 MAN1A2O60476 641 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 HSPA6P17066 643 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 CDK17Q00537 523 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 IDI1Q13907 227 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 SLC29A2Q14542 456 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 KYNUQ16719 465 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 LRRC36Q1X8D7 754 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 ZFYVE27Q5T4F4 411 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 NT5DC1Q5TFE4 455 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 EDC3Q96F86 508 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 MAGEB18Q96M61 343 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 TRPV5Q9NQA5 729 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 DNAJC17Q9NVM6 304 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 EPS15L1Q9UBC2 864 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 PACSIN2Q9UNF0 486 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 A6NJR5 290 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 BOLA2-SMG1P6H3BVE0 249 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 RNF113AO15541 343 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 SRGNP10124 158 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 HMOX2P30519 316 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 SARSP49591 514 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 MAP3K7CLP57077 242 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 KRT76Q01546 638 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 C10orf76Q5T2E6 689 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 TMEM63BQ5T3F8 832 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 KRT80Q6KB66 452 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 ILDR1Q86SU0 546 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 ENDOVQ8N8Q3 282 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 U2AF1L4Q8WU68 220 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 TMEM87BQ96K49 555 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 MRPL1Q9BYD6 325 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 FOXP1Q9H334 677 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 ANLNQ9NQW6 1124 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 ZC4H2Q9NQZ6 224 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 C6orf203Q9P0P8 240 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 TBK1Q9UHD2 729 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 DBR1Q9UK59 544 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 DMTF1Q9Y222 760 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 A0A0G2JND7 137 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 SYCE1LA8MT33 242 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 CAPN15O75808 1086 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 SERPING1P05155 500 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 GNAZP19086 355 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 GFPT1Q06210 699 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 ZNF174Q15697 407 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 CNNM4Q6P4Q7 775 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 ADAT2Q7Z6V5 191 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 FITM2Q8N6M3 262 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 DNAJC1Q96KC8 554 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 TLR10Q9BXR5 811 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 KCNJ14Q9UNX9 436 aa8.74□□□□□ -1.01
CRNKL1-205ENST00000496549 UMODL1Q5DID0 1318 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 ZNF335Q9H4Z2 1342 aaPredicted RBP8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 PNPLA6Q8IY17 1366 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 SPTLC1O15269 473 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 KRT36O76013 467 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 ACSL3O95573 720 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 KRT10P13645 584 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 NR1H3Q13133 447 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 NUP93Q8N1F7 819 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 NSL1Q96IY1 281 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 SNX27Q96L92 541 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 ZNF317Q96PQ6 595 aaPredicted RBP8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 ECSITQ9BQ95 431 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 STX18Q9P2W9 335 aaKnown RBP8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 TSPY2A6NKD2 308 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 I3L4J1 428 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 GIPC1O14908 333 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 ADCY6O43306 1168 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 FGGP02679 453 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 TSPY3P0CV98 308 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 TSPY8P0CW00 308 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 FDPSP14324 419 aaKnown RBP8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 TSPY1Q01534 308 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 CNGA3Q16281 694 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 PACS1Q6VY07 963 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 TXNDC2Q86VQ3 553 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 CCDC125Q86Z20 511 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 PPP1R14CQ8TAE6 165 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 MTBPQ96DY7 904 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 ZBED2Q9BTP6 218 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 PAIP1Q9H074 479 aaKnown RBP8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 STRN4Q9NRL3 753 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms