RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 SLC24A5Q71RS6 500 aa25.24■■□□□ 1.63
CHRD-217ENST00000496527 SRGAP1Q7Z6B7 1085 aa25.24■■□□□ 1.63
CHRD-217ENST00000496527 NPAS4Q8IUM7 802 aa25.24■■□□□ 1.63
CHRD-217ENST00000496527 NT5C3AQ9H0P0 336 aa25.24■■□□□ 1.63
CHRD-217ENST00000496527 E9PMD0 336 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 EYA4O95677 639 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 MARCKSP29966 332 aaPredicted RBP25.23■■□□□ 1.63
CHRD-217ENST00000496527 UBA7P41226 1012 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 PHKA2P46019 1235 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 HYIQ5T013 277 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 FAM102BQ5T8I3 360 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 CATSPER4Q7RTX7 472 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 CABP7Q86V35 215 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 KCTD17Q8N5Z5 321 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 ASAP3Q8TDY4 903 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 ZNF396Q96N95 335 aaPredicted RBP25.23■■□□□ 1.63
CHRD-217ENST00000496527 USP28Q96RU2 1077 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 PCDHB7Q9Y5E2 793 aa25.23■■□□□ 1.63
CHRD-217ENST00000496527 TTC3P53804 2025 aa25.22■■□□□ 1.63
CHRD-217ENST00000496527 C9IYK1 514 aa25.22■■□□□ 1.63
CHRD-217ENST00000496527 SLC26A4O43511 780 aa25.22■■□□□ 1.63
CHRD-217ENST00000496527 ARHGEF15O94989 841 aa25.22■■□□□ 1.63
CHRD-217ENST00000496527 GLRA2P23416 452 aa25.22■■□□□ 1.63
CHRD-217ENST00000496527 SP7Q8TDD2 431 aaPredicted RBP25.22■■□□□ 1.63
CHRD-217ENST00000496527 CALML4Q96GE6 196 aa25.22■■□□□ 1.63
CHRD-217ENST00000496527 PRDM12Q9H4Q4 367 aa25.22■■□□□ 1.63
CHRD-217ENST00000496527 CERS4Q9HA82 394 aa25.22■■□□□ 1.63
CHRD-217ENST00000496527 GPRC5CQ9NQ84 441 aa25.22■■□□□ 1.63
CHRD-217ENST00000496527 CHST12Q9NRB3 414 aa25.22■■□□□ 1.63
CHRD-217ENST00000496527 LINC01553A4QN01 128 aa25.21■■□□□ 1.63
CHRD-217ENST00000496527 F13A1P00488 732 aa25.21■■□□□ 1.63
CHRD-217ENST00000496527 PTENP60484 403 aa25.21■■□□□ 1.63
CHRD-217ENST00000496527 GRIN1Q05586 938 aa25.21■■□□□ 1.63
CHRD-217ENST00000496527 POU5F1BQ06416 359 aa25.21■■□□□ 1.63
CHRD-217ENST00000496527 CAPSQ13938 189 aa25.21■■□□□ 1.63
CHRD-217ENST00000496527 MYLIPQ8WY64 445 aa25.21■■□□□ 1.63
CHRD-217ENST00000496527 PNMA5Q96PV4 448 aa25.21■■□□□ 1.63
CHRD-217ENST00000496527 PLIN2Q99541 437 aa25.21■■□□□ 1.63
CHRD-217ENST00000496527 DACT1Q9NYF0 836 aa25.21■■□□□ 1.63
CHRD-217ENST00000496527 DGKIO75912 1065 aa25.2■■□□□ 1.62
CHRD-217ENST00000496527 FAM189BP81408 668 aa25.2■■□□□ 1.62
CHRD-217ENST00000496527 GRB10Q13322 594 aa25.2■■□□□ 1.62
CHRD-217ENST00000496527 SLC39A14Q15043 492 aa25.2■■□□□ 1.62
CHRD-217ENST00000496527 KCNK18Q7Z418 384 aa25.2■■□□□ 1.62
CHRD-217ENST00000496527 CRIPAKQ8N1N5 446 aa25.2■■□□□ 1.62
CHRD-217ENST00000496527 RASSF8Q8NHQ8 419 aa25.2■■□□□ 1.62
CHRD-217ENST00000496527 TGS1Q96RS0 853 aaKnown RBP25.2■■□□□ 1.62
CHRD-217ENST00000496527 MINDY3Q9H8M7 445 aa25.2■■□□□ 1.62
CHRD-217ENST00000496527 FBXO2Q9UK22 296 aaPredicted RBP25.2■■□□□ 1.62
CHRD-217ENST00000496527 PIN4Q9Y237 131 aaKnown RBP25.2■■□□□ 1.62
CHRD-217ENST00000496527 SRPRBQ9Y5M8 271 aaKnown RBP25.2■■□□□ 1.62
CHRD-217ENST00000496527 PKP1Q13835 747 aa25.19■■□□□ 1.62
CHRD-217ENST00000496527 STK38Q15208 465 aa25.19■■□□□ 1.62
CHRD-217ENST00000496527 TMEM119Q4V9L6 283 aa25.19■■□□□ 1.62
CHRD-217ENST00000496527 ARNTL2Q8WYA1 636 aa25.19■■□□□ 1.62
CHRD-217ENST00000496527 ZNF689Q96CS4 500 aaPredicted RBP25.19■■□□□ 1.62
CHRD-217ENST00000496527 GAS2L1Q99501 681 aaPredicted RBP25.19■■□□□ 1.62
CHRD-217ENST00000496527 CSRNP2Q9H175 543 aa25.19■■□□□ 1.62
CHRD-217ENST00000496527 STXBP5LQ9Y2K9 1186 aa25.19■■□□□ 1.62
CHRD-217ENST00000496527 MORC2Q9Y6X9 1032 aaPredicted RBP25.19■■□□□ 1.62
CHRD-217ENST00000496527 LRRIQ4A6NIV6 560 aa25.18■■□□□ 1.62
CHRD-217ENST00000496527 SSBP05455 408 aaKnown RBP eCLIP25.18■■□□□ 1.62
CHRD-217ENST00000496527 NASPP49321 788 aaPredicted RBP25.18■■□□□ 1.62
CHRD-217ENST00000496527 PCBP1Q15365 356 aaKnown RBP eCLIP25.18■■□□□ 1.62
CHRD-217ENST00000496527 TWF2Q6IBS0 349 aaKnown RBP25.18■■□□□ 1.62
CHRD-217ENST00000496527 IFNLR1Q8IU57 520 aaPredicted RBP25.18■■□□□ 1.62
CHRD-217ENST00000496527 FIBCD1Q8N539 461 aa25.18■■□□□ 1.62
CHRD-217ENST00000496527 KIFAP3Q92845 792 aa25.18■■□□□ 1.62
CHRD-217ENST00000496527 NFKBIZQ9BYH8 718 aa25.18■■□□□ 1.62
CHRD-217ENST00000496527 ELAC1Q9H777 363 aaKnown RBP25.18■■□□□ 1.62
CHRD-217ENST00000496527 TMEM161AQ9NX61 479 aa25.18■■□□□ 1.62
CHRD-217ENST00000496527 TFIP11Q9UBB9 837 aaKnown RBP25.18■■□□□ 1.62
CHRD-217ENST00000496527 MTUS1Q9ULD2 1270 aa25.18■■□□□ 1.62
CHRD-217ENST00000496527 ADGRA3Q8IWK6 1321 aa25.17■■□□□ 1.62
CHRD-217ENST00000496527 INO80B-WBP1J3KQ70 363 aa25.17■■□□□ 1.62
CHRD-217ENST00000496527 ERLIN2O94905 339 aa25.17■■□□□ 1.62
CHRD-217ENST00000496527 FOSL2P15408 326 aa25.17■■□□□ 1.62
CHRD-217ENST00000496527 ERVK-21P61565 698 aa25.17■■□□□ 1.62
CHRD-217ENST00000496527 BTG3Q14201 252 aaPredicted RBP25.17■■□□□ 1.62
CHRD-217ENST00000496527 FOXD4L6Q3SYB3 417 aaPredicted RBP25.17■■□□□ 1.62
CHRD-217ENST00000496527 FOXD4L3Q6VB84 417 aaPredicted RBP25.17■■□□□ 1.62
CHRD-217ENST00000496527 SPRED2Q7Z698 418 aa25.17■■□□□ 1.62
CHRD-217ENST00000496527 KRI1Q8N9T8 703 aaKnown RBP25.17■■□□□ 1.62
CHRD-217ENST00000496527 RC3H2Q9HBD1 1191 aaKnown RBP25.17■■□□□ 1.62
CHRD-217ENST00000496527 AGPAT5Q9NUQ2 364 aa25.17■■□□□ 1.62
CHRD-217ENST00000496527 A0A0U1RQF3 1178 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 NCBP1Q09161 790 aaKnown RBP25.16■■□□□ 1.62
CHRD-217ENST00000496527 KARSQ15046 597 aaKnown RBP25.16■■□□□ 1.62
CHRD-217ENST00000496527 PPP2R5AQ15172 486 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 SPECC1Q5M775 1068 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 RINT1Q6NUQ1 792 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 ECHDC2Q86YB7 292 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 SYT2Q8N9I0 419 aaPredicted RBP25.16■■□□□ 1.62
CHRD-217ENST00000496527 LINC00301Q8NCQ3 95 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 IFT74Q96LB3 600 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 CLIC6Q96NY7 704 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 RUSC1Q9BVN2 902 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 CCSER1Q9C0I3 900 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 POLD4Q9HCU8 107 aa25.16■■□□□ 1.62
CHRD-217ENST00000496527 MYO9BQ13459 2157 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms