RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CUEDC2Q9H467 287 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 TTC7AQ9ULT0 858 aaPredicted RBP9.78□□□□□ -0.84
HPS4-217ENST00000496385 ZMYND8Q9ULU4 1186 aaPredicted RBP9.78□□□□□ -0.84
HPS4-217ENST00000496385 DAAM1Q9Y4D1 1078 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 TMEM221A6NGB7 291 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 DCAF8L1A6NGE4 600 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 CETN3O15182 167 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 UPP2O95045 317 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 KLRK1P26718 216 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 FLT3P36888 993 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 SLC1A4P43007 532 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 KLK7P49862 253 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 PMS2P54278 862 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 INHBCP55103 352 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 CHRNDQ07001 517 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 MAP7Q14244 749 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 VWA3BQ502W6 1294 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 TTC38Q5R3I4 469 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 RASIP1Q5U651 963 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 TBC1D10CQ8IV04 446 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 SMYD1Q8NB12 490 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 STAMQ92783 540 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 CCDC97Q96F63 343 aaPredicted RBP9.78□□□□□ -0.84
HPS4-217ENST00000496385 CENPKQ9BS16 269 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 CARD9Q9H257 536 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 SEC63Q9UGP8 760 aaKnown RBP9.78□□□□□ -0.84
HPS4-217ENST00000496385 DIS3Q9Y2L1 958 aaKnown RBP9.78□□□□□ -0.84
HPS4-217ENST00000496385 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.78□□□□□ -0.84
HPS4-217ENST00000496385 FAM187AA6NFU0 413 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 BTBD19C9JJ37 291 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 E2F6O75461 281 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 FTCDO95954 541 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 AFPP02771 609 aaKnown RBP9.77□□□□□ -0.84
HPS4-217ENST00000496385 OATP04181 439 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 SHBGP04278 402 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 SULT2A1Q06520 285 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 CEP128Q6ZU80 1094 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 UNC13DQ70J99 1090 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 DDX42Q86XP3 938 aaKnown RBP eCLIP9.77□□□□□ -0.84
HPS4-217ENST00000496385 SP8Q8IXZ3 490 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 PPFIBP2Q8ND30 876 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 FAM13CQ8NE31 585 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 OXER1Q8TDS5 423 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 PPP2R3CQ969Q6 453 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 SMC6Q96SB8 1091 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 TSPAN18Q96SJ8 248 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 NDUFA13Q9P0J0 144 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 POLLQ9UGP5 575 aa9.77□□□□□ -0.84
HPS4-217ENST00000496385 LRRC53A6NM62 1247 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 B4E1Z4 1266 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 KCNK3O14649 394 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 KLRC4O43908 158 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 CEP104O60308 925 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 UFL1O94874 794 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 VIL1P09327 827 aaKnown RBP9.77□□□□□ -0.85
HPS4-217ENST00000496385 GFPT1Q06210 699 aaPredicted RBP9.77□□□□□ -0.85
HPS4-217ENST00000496385 MCL1Q07820 350 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 PTGDRQ13258 359 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 SLC18A3Q16572 532 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 MAN2A1Q16706 1144 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 AOC3Q16853 763 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 CNPY1Q3B7I2 92 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 USH1GQ495M9 461 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 HGSNATQ68CP4 663 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 FOXR2Q6PJQ5 311 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 RRAGAQ7L523 313 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 KIAA0825Q8IV33 1275 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 ANKRD13CQ8N6S4 541 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 LRRC8CQ8TDW0 803 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 CKAP2Q8WWK9 683 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 HIC2Q96JB3 615 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 TAOK3Q9H2K8 898 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 TLE6Q9H808 572 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 RMI1Q9H9A7 625 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 PCDH18Q9HCL0 1135 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 USP40Q9NVE5 1235 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 DDX43Q9NXZ2 648 aaKnown RBP9.77□□□□□ -0.85
HPS4-217ENST00000496385 MAPK8IP1Q9UQF2 711 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 ATP8A1Q9Y2Q0 1164 aa9.77□□□□□ -0.85
HPS4-217ENST00000496385 RTL9Q8NET4 1388 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 ARFGEF1Q9Y6D6 1849 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 RBM47A0AV96 593 aaKnown RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 KRIT1O00522 736 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 PFDN1O60925 122 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 ZFXP17010 805 aaPredicted RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 SERPINB4P48594 390 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 TIMM10P62072 90 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 RCN2Q14257 317 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 METTL24Q5JXM2 366 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 ZBTB8BQ8NAP8 495 aaPredicted RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 ZNF653Q96CK0 615 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 PUS7LQ9H0K6 701 aaKnown RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 RANBP17Q9H2T7 1088 aaKnown RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 EPB41L4BQ9H329 900 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 FGFR1OP2Q9NVK5 253 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 NMRK1Q9NWW6 199 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 PAIP2BQ9ULR5 123 aaKnown RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 BZW2Q9Y6E2 419 aaKnown RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 MYH6P13533 1939 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 ATP9AO75110 1047 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms