RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	NBN	O60934	754 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	GPR32	O75388	356 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	RSPH10B	P0C881	870 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	PLCG1	P19174	1290 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	NCL	P19338	710 aa	Known RBP	13.24	□□□□□ -0.29
APTX-233	ENST00000496030	ME1	P48163	572 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	MRPS6	P82932	125 aa	Known RBP	13.24	□□□□□ -0.29
APTX-233	ENST00000496030	TMEM62	Q0P6H9	643 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	EMC2	Q15006	297 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	ZRSR1	Q15695	479 aa	Known RBP	13.24	□□□□□ -0.29
APTX-233	ENST00000496030	TCTN1	Q2MV58	587 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	NAALADL2	Q58DX5	795 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	PADI6	Q6TGC4	694 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	CCDC155	Q8N6L0	562 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	METTL13	Q8N6R0	699 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	RETREG2	Q8NC44	543 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	ARNTL2	Q8WYA1	636 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	TMEM143	Q96AN5	459 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.24	□□□□□ -0.29
APTX-233	ENST00000496030	ADAMTS10	Q9H324	1103 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	TANC1	Q9C0D5	1861 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	ZNF318	Q5VUA4	2279 aa		13.24	□□□□□ -0.29
APTX-233	ENST00000496030	PTPRS	Q13332	1948 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	KDM3A	Q9Y4C1	1321 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	USP34	Q70CQ2	3546 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	DGAT1	O75907	488 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	CXCL10	P02778	98 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	VTN	P04004	478 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	CTSH	P09668	335 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	CYP11B2	P19099	503 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	ARL2	P36404	184 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	SLC12A3	P55017	1021 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	TAP1	Q03518	808 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	RESP18	Q5W5W9	173 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	ADAL	Q6DHV7	355 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	C1orf186	Q6ZWK4	172 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	SYT2	Q8N9I0	419 aa	Predicted RBP	13.23	□□□□□ -0.29
APTX-233	ENST00000496030	PRPF31	Q8WWY3	499 aa	Known RBP	13.23	□□□□□ -0.29
APTX-233	ENST00000496030	CALML4	Q96GE6	196 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	PANK2	Q9BZ23	570 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	CELF4	Q9BZC1	486 aa	Known RBP	13.23	□□□□□ -0.29
APTX-233	ENST00000496030	NT5C3A	Q9H0P0	336 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.23	□□□□□ -0.29
APTX-233	ENST00000496030	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.23	□□□□□ -0.29
APTX-233	ENST00000496030	CDY2A	Q9Y6F7	541 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	CFAP54	Q96N23	3096 aa		13.23	□□□□□ -0.29
APTX-233	ENST00000496030	FAM237A	A0A1B0GTK4	181 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	ARHGEF35	A5YM69	484 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	LPXN	O60711	386 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	RPLP2	P05387	115 aa	Known RBP	13.22	□□□□□ -0.29
APTX-233	ENST00000496030	PLA2G4B	P0C869	781 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	POLG	P54098	1239 aa	Predicted RBP	13.22	□□□□□ -0.29
APTX-233	ENST00000496030	LPIN1	Q14693	890 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	E2F4	Q16254	413 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	ARSH	Q5FYA8	562 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	IER5	Q5VY09	327 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	RINT1	Q6NUQ1	792 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	RSPH3	Q86UC2	560 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	KSR1	Q8IVT5	923 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	EXOC8	Q8IYI6	725 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	DAW1	Q8N136	415 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	TMEM40	Q8WWA1	233 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	SLC7A3	Q8WY07	619 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	RAD54L	Q92698	747 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	FBXL18	Q96ME1	805 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	JPH2	Q9BR39	696 aa	Predicted RBP	13.22	□□□□□ -0.29
APTX-233	ENST00000496030	RUSC1	Q9BVN2	902 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	POLD4	Q9HCU8	107 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	GPRC5C	Q9NQ84	441 aa		13.22	□□□□□ -0.29
APTX-233	ENST00000496030	GAS2	O43903	313 aa	Known RBP	13.21	□□□□□ -0.29
APTX-233	ENST00000496030	USO1	O60763	962 aa	Known RBP	13.21	□□□□□ -0.29
APTX-233	ENST00000496030	CMA1	P23946	247 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	TMOD1	P28289	359 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	RFC2	P35250	354 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	GPC3	P51654	580 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	NLRP11	P59045	1033 aa	Known RBP	13.21	□□□□□ -0.29
APTX-233	ENST00000496030	MAPK7	Q13164	816 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	MCM6	Q14566	821 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	KIZ	Q2M2Z5	673 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	FBXO47	Q5MNV8	452 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	ASAP3	Q8TDY4	903 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	CDK5RAP3	Q96JB5	506 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	ZNF668	Q96K58	619 aa	Predicted RBP	13.21	□□□□□ -0.29
APTX-233	ENST00000496030	MTR	Q99707	1265 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	AGO3	Q9H9G7	860 aa	Known RBP	13.21	□□□□□ -0.29
APTX-233	ENST00000496030	ATP6V0A4	Q9HBG4	840 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	HPSE	Q9Y251	543 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030	TRPV2	Q9Y5S1	764 aa		13.21	□□□□□ -0.29
APTX-233	ENST00000496030		A0A1W2PQ27	194 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030		A0A1W2PQ64	194 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030		A0A1W2PQD8	194 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	PARN	O95453	639 aa	Known RBP	13.2	□□□□□ -0.3
APTX-233	ENST00000496030	GLRA2	P23416	452 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	GUCY2C	P25092	1073 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	DNM2	P50570	870 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	CRYBB1	P53674	252 aa	Predicted RBP	13.2	□□□□□ -0.3
APTX-233	ENST00000496030	LAMTOR4	Q0VGL1	99 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	PLEKHG4	Q58EX7	1191 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	RRAGB	Q5VZM2	374 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	CLEC17A	Q6ZS10	378 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms