RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	MED24	O75448	989 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	BMP15	O95972	392 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	STAG3L1	P0CL83	205 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	TAP1	Q03518	808 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	MXD4	Q14582	209 aa	Predicted RBP	13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	EMC2	Q15006	297 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	SLC24A5	Q71RS6	500 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	FAM228A	Q86W67	206 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	RHPN2	Q8IUC4	686 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	KCTD17	Q8N5Z5	321 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	PRPF31	Q8WWY3	499 aa	Known RBP	13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	PSPC1	Q8WXF1	523 aa	Known RBP	13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	PPP1R16B	Q96T49	567 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	MTR	Q99707	1265 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	COL4A3BP	Q9Y5P4	624 aa		13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899	MYH9	P35579	1960 aa	Known RBP	13.78	□□□□□ -0.2
MRPL55-233	ENST00000495899		A0A087WZ62	844 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	DENND3	A2RUS2	1198 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	UPP2	O95045	317 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	CCT6A	P40227	531 aa	Known RBP	13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	SARS	P49591	514 aa	Known RBP	13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	FAM189B	P81408	668 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	POU5F1B	Q06416	359 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	IL17A	Q16552	155 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	KRT79	Q5XKE5	535 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	FAM117B	Q6P1L5	589 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	NPAS4	Q8IUM7	802 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	PIGO	Q8TEQ8	1089 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	LINC01599	Q8WXQ3	324 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	TMEM143	Q96AN5	459 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	YME1L1	Q96TA2	773 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	ADAM2	Q99965	735 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	ATP6V0A4	Q9HBG4	840 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	CHST12	Q9NRB3	414 aa		13.77	□□□□□ -0.21
MRPL55-233	ENST00000495899	LCHN	A4D1U4	455 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	LINC01553	A4QN01	128 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	STX6	O43752	255 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	DGKI	O75912	1065 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	ZSCAN20	P17040	1043 aa	Predicted RBP	13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	SFPQ	P23246	707 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	ERVK-21	P61565	698 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	LAMTOR4	Q0VGL1	99 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	DSC3	Q14574	896 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	POTEG	Q6S5H5	508 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	SRGAP1	Q7Z6B7	1085 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	FERMT3	Q86UX7	667 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	MCPH1	Q8NEM0	835 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	MYLIP	Q8WY64	445 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	AK8	Q96MA6	479 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	SAMD11	Q96NU1	681 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	TGS1	Q96RS0	853 aa	Known RBP	13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	GAS2L1	Q99501	681 aa	Predicted RBP	13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	PRDM12	Q9H4Q4	367 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	ELAC1	Q9H777	363 aa	Known RBP	13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	IFT122	Q9HBG6	1241 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899	XPNPEP1	Q9NQW7	623 aa		13.76	□□□□□ -0.21
MRPL55-233	ENST00000495899		C9IYK1	514 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	RBAK-RBAKDN	I3L0D1	243 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	SLC26A4	O43511	780 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	MGEA5	O60502	916 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	HSP90AA1	P07900	732 aa	Known RBP	13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	FOSL2	P15408	326 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	POU3F3	P20264	500 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	ARL2	P36404	184 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	TFDP1	Q14186	410 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	KSR1	Q8IVT5	923 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	SNX29	Q8TEQ0	813 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	ZNF689	Q96CS4	500 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	ZNF668	Q96K58	619 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	NLRP4	Q96MN2	994 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	TRAIP	Q9BWF2	469 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	DACT1	Q9NYF0	836 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	LRFN2	Q9ULH4	789 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	KIAA1024	Q9UPX6	916 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	DNM3	Q9UQ16	869 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	MTMR6	Q9Y217	621 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899	PCDHB7	Q9Y5E2	793 aa		13.75	□□□□□ -0.21
MRPL55-233	ENST00000495899		A0A087WWV3	80 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	ARHGEF35	A5YM69	484 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	VWA3A	A6NCI4	1184 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	ARHGEF15	O94989	841 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	SRGAP2C	P0DJJ0	459 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	CYP11B2	P19099	503 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	PHKA2	P46019	1235 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	REST	Q13127	1097 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	SF3A1	Q15459	793 aa	Known RBP	13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	ECM1	Q16610	540 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	PADI6	Q6TGC4	694 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	FIBCD1	Q8N539	461 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	RNF149	Q8NC42	400 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	NFKBIZ	Q9BYH8	718 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	RC3H2	Q9HBD1	1191 aa	Known RBP	13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	DDX19A	Q9NUU7	478 aa	Known RBP	13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	TMEM161A	Q9NX61	479 aa		13.74	□□□□□ -0.21
MRPL55-233	ENST00000495899	COL4A6	Q14031	1691 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	ADGRA3	Q8IWK6	1321 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	CHD7	Q9P2D1	2997 aa		13.73	□□□□□ -0.21

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