RNA–Protein interactions for RNA: ENST00000495612.1

CLCN1-204, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 278 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-204ENST00000495612 SLC44A4Q53GD3 710 aa11.66□□□□□ -0.54
CLCN1-204ENST00000495612 TSSK4Q6SA08 328 aa11.66□□□□□ -0.54
CLCN1-204ENST00000495612 TMEM173Q86WV6 379 aaPredicted RBP11.66□□□□□ -0.54
CLCN1-204ENST00000495612 LTB4R2Q9NPC1 389 aa11.66□□□□□ -0.54
CLCN1-204ENST00000495612 DDX19BQ9UMR2 479 aa11.66□□□□□ -0.54
CLCN1-204ENST00000495612 LHX6Q9UPM6 363 aa11.66□□□□□ -0.54
CLCN1-204ENST00000495612 DMXL2Q8TDJ6 3036 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 A0A0U1RQF3 1178 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 LILRB3O75022 631 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 C1RP00736 705 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 PFKPQ01813 784 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 RING1Q06587 406 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 PPP2R5DQ14738 602 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 STAG2Q8N3U4 1231 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 HDAC7Q8WUI4 952 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 MAP4K1Q92918 833 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 ZSCAN10Q96SZ4 725 aaPredicted RBP11.65□□□□□ -0.54
CLCN1-204ENST00000495612 CHMP4BQ9H444 224 aaKnown RBP11.65□□□□□ -0.54
CLCN1-204ENST00000495612 MAN1C1Q9NR34 630 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 HELLSQ9NRZ9 838 aa11.65□□□□□ -0.54
CLCN1-204ENST00000495612 SRRM3A6NNA2 597 aaPredicted RBP11.64□□□□□ -0.55
CLCN1-204ENST00000495612 TAF4O00268 1085 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 INPPL1O15357 1258 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 ZC3H11AO75152 810 aaKnown RBP eCLIP11.64□□□□□ -0.55
CLCN1-204ENST00000495612 TDGF1P13385 188 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 STAT5BP51692 787 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 HAND2P61296 217 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 LPAL2Q16609 132 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 KIZQ2M2Z5 673 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 ZNF598Q86UK7 904 aaKnown RBP11.64□□□□□ -0.55
CLCN1-204ENST00000495612 TBC1D10CQ8IV04 446 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 ZNF710Q8N1W2 664 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 ENAHQ8N8S7 591 aaPredicted RBP11.64□□□□□ -0.55
CLCN1-204ENST00000495612 PI4K2BQ8TCG2 481 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 HELQQ8TDG4 1101 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 SMG7Q92540 1137 aaKnown RBP11.64□□□□□ -0.55
CLCN1-204ENST00000495612 OSMRQ99650 979 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 IER2Q9BTL4 223 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 RIOX1Q9H6W3 641 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 JPH1Q9HDC5 661 aaPredicted RBP11.64□□□□□ -0.55
CLCN1-204ENST00000495612 IGSF10Q6WRI0 2623 aa11.64□□□□□ -0.55
CLCN1-204ENST00000495612 PNMA6FA0A0J9YX94 578 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 PALM3A6NDB9 673 aaPredicted RBP11.63□□□□□ -0.55
CLCN1-204ENST00000495612 PIK3CDO00329 1044 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 HBP1O60381 514 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 GPR32O75388 356 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 GALTP07902 379 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 ITGB5P18084 799 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 CNR2P34972 360 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 MTAPQ13126 283 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 MTMR1Q13613 665 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 HOMER1Q86YM7 354 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 RNF169Q8NCN4 708 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 PHKBQ93100 1093 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 ZNF707Q96C28 371 aaPredicted RBP11.63□□□□□ -0.55
CLCN1-204ENST00000495612 PIGSQ96S52 555 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 VN1R3Q9BXE9 311 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 TMEM121BQ9BXQ6 578 aaPredicted RBP11.63□□□□□ -0.55
CLCN1-204ENST00000495612 MRPL17Q9NRX2 175 aaKnown RBP11.63□□□□□ -0.55
CLCN1-204ENST00000495612 MAD2L2Q9UI95 211 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 SSX2IPQ9Y2D8 614 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 COL1A2P08123 1366 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 PATJQ8NI35 1801 aa11.63□□□□□ -0.55
CLCN1-204ENST00000495612 NEDD4P46934 1319 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 RFPL2O75678 378 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 KCNK5O95279 499 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 ADH1AP07327 375 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 ADCY1Q08828 1119 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 FZD5Q13467 585 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 PRR23BQ6ZRT6 265 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 MTSS1LQ765P7 747 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 TICAM2Q86XR7 235 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 SMARCC2Q8TAQ2 1214 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 BCL7CQ8WUZ0 217 aaPredicted RBP11.62□□□□□ -0.55
CLCN1-204ENST00000495612 FGF14Q92915 247 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 RPP25Q9BUL9 199 aaKnown RBP11.62□□□□□ -0.55
CLCN1-204ENST00000495612 PLEKHA4Q9H4M7 779 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 PIDD1Q9HB75 910 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 ZDHHC7Q9NXF8 308 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 DACT1Q9NYF0 836 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 SLC9A2Q9UBY0 812 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 MRPS17Q9Y2R5 130 aaKnown RBP11.62□□□□□ -0.55
CLCN1-204ENST00000495612 UBIAD1Q9Y5Z9 338 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 LAMA5O15230 3695 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 NAV2Q8IVL1 2488 aa11.62□□□□□ -0.55
CLCN1-204ENST00000495612 LOC400499M0QZD8 3231 aa11.61□□□□□ -0.55
CLCN1-204ENST00000495612 GLUD1P00367 558 aa11.61□□□□□ -0.55
CLCN1-204ENST00000495612 CD72P21854 359 aa11.61□□□□□ -0.55
CLCN1-204ENST00000495612 TARSP26639 723 aaKnown RBP11.61□□□□□ -0.55
CLCN1-204ENST00000495612 SIM2Q14190 667 aaPredicted RBP11.61□□□□□ -0.55
CLCN1-204ENST00000495612 ZNF484Q5JVG2 852 aa11.61□□□□□ -0.55
CLCN1-204ENST00000495612 PARM1Q6UWI2 310 aa11.61□□□□□ -0.55
CLCN1-204ENST00000495612 ZNF852Q6ZMS4 543 aa11.61□□□□□ -0.55
CLCN1-204ENST00000495612 GET4Q7L5D6 327 aaPredicted RBP11.61□□□□□ -0.55
CLCN1-204ENST00000495612 CUL5Q93034 780 aa11.61□□□□□ -0.55
CLCN1-204ENST00000495612 TRAIPQ9BWF2 469 aa11.61□□□□□ -0.55
CLCN1-204ENST00000495612 LSM14BQ9BX40 385 aaKnown RBP11.61□□□□□ -0.55
CLCN1-204ENST00000495612 NT5C3AQ9H0P0 336 aa11.61□□□□□ -0.55
CLCN1-204ENST00000495612 NRDE2Q9H7Z3 1164 aa11.61□□□□□ -0.55
CLCN1-204ENST00000495612 RXFP3Q9NSD7 469 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms