RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 ASB2Q96Q27 587 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 MTRQ99707 1265 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 PLVAPQ9BX97 442 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 BACH2Q9BYV9 841 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 IFT122Q9HBG6 1241 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 RALGAPA2Q2PPJ7 1873 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 GRM6O15303 877 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 GAS2O43903 313 aaKnown RBP20.05■□□□□ 0.8
COL20A1-207ENST00000494913 CATSPER4Q7RTX7 472 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 CATSPER3Q86XQ3 398 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 ECHDC2Q86YB7 292 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 C4orf32Q8N8J7 132 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 RNF169Q8NCN4 708 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 CCDC43Q96MW1 224 aaKnown RBP20.05■□□□□ 0.8
COL20A1-207ENST00000494913 CHST12Q9NRB3 414 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 DACT1Q9NYF0 836 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 SMC3Q9UQE7 1217 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 H3BQV1 296 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 MED24O75448 989 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 XRCC6P12956 609 aaKnown RBP eCLIP20.05■□□□□ 0.8
COL20A1-207ENST00000494913 SPOUT1Q5T280 376 aaKnown RBP20.05■□□□□ 0.8
COL20A1-207ENST00000494913 FERMT3Q86UX7 667 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 ERMNQ8TAM6 284 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 HLA-CQ95604 372 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 TUFT1Q9NNX1 390 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 ALG13Q9NP73 1137 aaKnown RBP20.05■□□□□ 0.8
COL20A1-207ENST00000494913 XPNPEP1Q9NQW7 623 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 COG5Q9UP83 839 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 PCDHB6Q9Y5E3 794 aa20.05■□□□□ 0.8
COL20A1-207ENST00000494913 MYO7AQ13402 2215 aa20.04■□□□□ 0.8
COL20A1-207ENST00000494913 A0A0U1RQF3 1178 aa20.04■□□□□ 0.8
COL20A1-207ENST00000494913 ASAP2O43150 1006 aa20.04■□□□□ 0.8
COL20A1-207ENST00000494913 DGAT1O75907 488 aa20.04■□□□□ 0.8
COL20A1-207ENST00000494913 RARRES1P49788 294 aa20.04■□□□□ 0.8
COL20A1-207ENST00000494913 RNF149Q8NC42 400 aa20.04■□□□□ 0.8
COL20A1-207ENST00000494913 SYMPKQ92797 1274 aaKnown RBP20.04■□□□□ 0.8
COL20A1-207ENST00000494913 POLR3CQ9BUI4 534 aaPredicted RBP20.04■□□□□ 0.8
COL20A1-207ENST00000494913 TYW1Q9NV66 732 aaKnown RBP20.04■□□□□ 0.8
COL20A1-207ENST00000494913 PLAGL2Q9UPG8 496 aa20.04■□□□□ 0.8
COL20A1-207ENST00000494913 PIN4Q9Y237 131 aaKnown RBP20.04■□□□□ 0.8
COL20A1-207ENST00000494913 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.04■□□□□ 0.8
COL20A1-207ENST00000494913 TTC28Q96AY4 2481 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 HOXA2O43364 376 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 PTGDRQ13258 359 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 AAK1Q2M2I8 961 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 TIGD5Q53EQ6 642 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 TWF2Q6IBS0 349 aaKnown RBP20.03■□□□□ 0.8
COL20A1-207ENST00000494913 SRGAP1Q7Z6B7 1085 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 KLHL23Q8NBE8 558 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 P2RX5Q93086 422 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 NACC1Q96RE7 527 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 TMEM117Q9H0C3 514 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 LMAN2LQ9H0V9 348 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 MINDY3Q9H8M7 445 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 RNF19AQ9NV58 838 aa20.03■□□□□ 0.8
COL20A1-207ENST00000494913 FNDC1Q4ZHG4 1894 aaPredicted RBP20.02■□□□□ 0.8
COL20A1-207ENST00000494913 CSPG5O95196 566 aa20.02■□□□□ 0.8
COL20A1-207ENST00000494913 EOMESO95936 686 aa20.02■□□□□ 0.8
COL20A1-207ENST00000494913 RPA1P27694 616 aa20.02■□□□□ 0.8
COL20A1-207ENST00000494913 MXD4Q14582 209 aaPredicted RBP20.02■□□□□ 0.8
COL20A1-207ENST00000494913 NAALADL2Q58DX5 795 aa20.02■□□□□ 0.8
COL20A1-207ENST00000494913 ABI1Q8IZP0 508 aa20.02■□□□□ 0.8
COL20A1-207ENST00000494913 CASD1Q96PB1 797 aa20.02■□□□□ 0.8
COL20A1-207ENST00000494913 HCSTQ9UBK5 93 aa20.02■□□□□ 0.8
COL20A1-207ENST00000494913 PCDHB12Q9Y5F1 795 aa20.02■□□□□ 0.8
COL20A1-207ENST00000494913 BRWD1Q9NSI6 2320 aa20.02■□□□□ 0.8
COL20A1-207ENST00000494913 ARID2Q68CP9 1835 aa20.01■□□□□ 0.79
COL20A1-207ENST00000494913 ITGB1P05556 798 aa20.01■□□□□ 0.79
COL20A1-207ENST00000494913 PHKA2P46019 1235 aa20.01■□□□□ 0.79
COL20A1-207ENST00000494913 FXR2P51116 673 aaKnown RBP eCLIP20.01■□□□□ 0.79
COL20A1-207ENST00000494913 TCEAL5Q5H9L2 206 aa20.01■□□□□ 0.79
COL20A1-207ENST00000494913 LARP1BQ659C4 914 aaKnown RBP20.01■□□□□ 0.79
COL20A1-207ENST00000494913 POTEGQ6S5H5 508 aa20.01■□□□□ 0.79
COL20A1-207ENST00000494913 ZNF598Q86UK7 904 aaKnown RBP20.01■□□□□ 0.79
COL20A1-207ENST00000494913 SPPL3Q8TCT6 385 aa20.01■□□□□ 0.79
COL20A1-207ENST00000494913 NSUN3Q9H649 340 aaKnown RBP20.01■□□□□ 0.79
COL20A1-207ENST00000494913 AAASQ9NRG9 546 aa20.01■□□□□ 0.79
COL20A1-207ENST00000494913 LRWD1Q9UFC0 647 aa20.01■□□□□ 0.79
COL20A1-207ENST00000494913 DBR1Q9UK59 544 aaKnown RBP20.01■□□□□ 0.79
COL20A1-207ENST00000494913 USO1O60763 962 aaKnown RBP20■□□□□ 0.79
COL20A1-207ENST00000494913 ATF7P17544 494 aaPredicted RBP20■□□□□ 0.79
COL20A1-207ENST00000494913 ARL2P36404 184 aa20■□□□□ 0.79
COL20A1-207ENST00000494913 CCT6AP40227 531 aaKnown RBP20■□□□□ 0.79
COL20A1-207ENST00000494913 KCNQ1P51787 676 aa20■□□□□ 0.79
COL20A1-207ENST00000494913 PDIA5Q14554 519 aa20■□□□□ 0.79
COL20A1-207ENST00000494913 CLLU1OSQ5K130 101 aa20■□□□□ 0.79
COL20A1-207ENST00000494913 MAEAQ7L5Y9 396 aa20■□□□□ 0.79
COL20A1-207ENST00000494913 ASAP3Q8TDY4 903 aa20■□□□□ 0.79
COL20A1-207ENST00000494913 TRAIPQ9BWF2 469 aa20■□□□□ 0.79
COL20A1-207ENST00000494913 CWH43Q9H720 699 aa20■□□□□ 0.79
COL20A1-207ENST00000494913 PTENP60484 403 aa19.99■□□□□ 0.79
COL20A1-207ENST00000494913 CAMK1Q14012 370 aa19.99■□□□□ 0.79
COL20A1-207ENST00000494913 TFDP1Q14186 410 aa19.99■□□□□ 0.79
COL20A1-207ENST00000494913 LONRF3Q496Y0 759 aa19.99■□□□□ 0.79
COL20A1-207ENST00000494913 RILPL1Q5EBL4 403 aa19.99■□□□□ 0.79
COL20A1-207ENST00000494913 HAUS3Q68CZ6 603 aa19.99■□□□□ 0.79
COL20A1-207ENST00000494913 LRRC55Q6ZSA7 311 aa19.99■□□□□ 0.79
COL20A1-207ENST00000494913 HELQQ8TDG4 1101 aa19.99■□□□□ 0.79
COL20A1-207ENST00000494913 POLR3FQ9H1D9 316 aaPredicted RBP19.99■□□□□ 0.79
COL20A1-207ENST00000494913 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms