RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 PPME1Q9Y570 386 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.07□□□□□ -1.12
RBM39-239ENST00000494274 PCDHB6Q9Y5E3 794 aa8.07□□□□□ -1.12
RBM39-239ENST00000494274 A0A0U1RQF3 1178 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 C5orf67F2Z3F1 127 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 HOXA2O43364 376 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 USO1O60763 962 aaKnown RBP8.06□□□□□ -1.12
RBM39-239ENST00000494274 MED24O75448 989 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 DGAT1O75907 488 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 ITGB1P05556 798 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 LINC00271P0C7V0 271 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 XRCC6P12956 609 aaKnown RBP eCLIP8.06□□□□□ -1.123e-9■■□□□ 12.4
RBM39-239ENST00000494274 CCT6AP40227 531 aaKnown RBP8.06□□□□□ -1.12
RBM39-239ENST00000494274 TRAPPC10P48553 1259 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 RARRES1P49788 294 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 TOB1P50616 345 aaPredicted RBP8.06□□□□□ -1.12
RBM39-239ENST00000494274 KCNQ1P51787 676 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 NCBP1Q09161 790 aaKnown RBP8.06□□□□□ -1.12
RBM39-239ENST00000494274 PTGDRQ13258 359 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 ORC2Q13416 577 aaPredicted RBP8.06□□□□□ -1.12
RBM39-239ENST00000494274 AAK1Q2M2I8 961 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 TCEAL5Q5H9L2 206 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 SRGAP1Q7Z6B7 1085 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 FERMT3Q86UX7 667 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 C4orf32Q8N8J7 132 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 KLHL23Q8NBE8 558 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 SPPL3Q8TCT6 385 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 NEK9Q8TD19 979 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 HELQQ8TDG4 1101 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 CASD1Q96PB1 797 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 NACC1Q96RE7 527 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 PLVAPQ9BX97 442 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 BACH2Q9BYV9 841 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 TMEM117Q9H0C3 514 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 IFT122Q9HBG6 1241 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 XPNPEP1Q9NQW7 623 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 AAASQ9NRG9 546 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 HCSTQ9UBK5 93 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 LRWD1Q9UFC0 647 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 PCDHB12Q9Y5F1 795 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 GTF3C3Q9Y5Q9 886 aa8.06□□□□□ -1.12
RBM39-239ENST00000494274 TRIP12Q14669 1992 aaPredicted RBP8.05□□□□□ -1.12
RBM39-239ENST00000494274 INO80B-WBP1J3KQ70 363 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 GAS2O43903 313 aaKnown RBP8.05□□□□□ -1.12
RBM39-239ENST00000494274 EOMESO95936 686 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 KCNA5P22460 613 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 PHKA2P46019 1235 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 TFDP1Q14186 410 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 PDIA5Q14554 519 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 MXD4Q14582 209 aaPredicted RBP8.05□□□□□ -1.12
RBM39-239ENST00000494274 ZRSR1Q15695 479 aaKnown RBP8.05□□□□□ -1.12
RBM39-239ENST00000494274 TIGD5Q53EQ6 642 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 RILPL1Q5EBL4 403 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 POTEGQ6S5H5 508 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 DTHD1Q6ZMT9 781 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 RBM23Q86U06 439 aaKnown RBP8.05□□□□□ -1.12
RBM39-239ENST00000494274 THNSL1Q8IYQ7 743 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 ASAP3Q8TDY4 903 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 POF1BQ8WVV4 589 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 LPPQ93052 612 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 P2RX5Q93086 422 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 POLR3CQ9BUI4 534 aaPredicted RBP8.05□□□□□ -1.12
RBM39-239ENST00000494274 NSUN3Q9H649 340 aaKnown RBP8.05□□□□□ -1.12
RBM39-239ENST00000494274 MINDY3Q9H8M7 445 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 POLD4Q9HCU8 107 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 TUFT1Q9NNX1 390 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 GPRC5CQ9NQ84 441 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 KIAA1024Q9UPX6 916 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 INPP5FQ9Y2H2 1132 aa8.05□□□□□ -1.12
RBM39-239ENST00000494274 DOCK5Q9H7D0 1870 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 COL6A3P12111 3177 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.04□□□□□ -1.12
RBM39-239ENST00000494274 ARHGEF35A5YM69 484 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 NT5C1B-RDH14C9J2C7 533 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 H3BQ06 376 aaPredicted RBP8.04□□□□□ -1.12
RBM39-239ENST00000494274 FGF18O76093 207 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 ERLIN2O94905 339 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 SKIP12755 728 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 BMP1P13497 986 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 DNAJB1P25685 340 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 RPA1P27694 616 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 CDC25AP30304 524 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 HOXA11P31270 313 aaPredicted RBP8.04□□□□□ -1.12
RBM39-239ENST00000494274 IRS1P35568 1242 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 ARL2P36404 184 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 PBX3P40426 434 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 FXR2P51116 673 aaKnown RBP eCLIP8.04□□□□□ -1.125e-6■□□□□ 9.5
RBM39-239ENST00000494274 CAMK1Q14012 370 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 ECM1Q16610 540 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 NAALADL2Q58DX5 795 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 CLLU1OSQ5K130 101 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 KRT79Q5XKE5 535 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 HAUS3Q68CZ6 603 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 PADI6Q6TGC4 694 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 LRRC55Q6ZSA7 311 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 ZNF598Q86UK7 904 aaKnown RBP8.04□□□□□ -1.12
RBM39-239ENST00000494274 COLGALT1Q8NBJ5 622 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 ADAMTS19Q8TE59 1207 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 SNX29Q8TEQ0 813 aa8.04□□□□□ -1.12
RBM39-239ENST00000494274 PGBD4Q96DM1 585 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms