RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 RCAN3Q9UKA8 241 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 PCDHB6Q9Y5E3 794 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 CDC14BO60729 498 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 PPFIA4O75335 1185 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 IPO13O94829 963 aaKnown RBP3.21□□□□□ -1.9
LMNB1-207ENST00000494185 PRPF6O94906 941 aaKnown RBP3.21□□□□□ -1.9
LMNB1-207ENST00000494185 JUNP05412 331 aaKnown RBP3.21□□□□□ -1.9
LMNB1-207ENST00000494185 COL6A1P12109 1028 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 CR2P20023 1033 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 CSF2RBP32927 897 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 RGS3P49796 1198 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 SELENOPP49908 381 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 CDKN1CP49918 316 aaPredicted RBP3.21□□□□□ -1.9
LMNB1-207ENST00000494185 MRE11P49959 708 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 SLC5A3P53794 718 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 RRADP55042 308 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 CD83Q01151 205 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 NFYCQ13952 458 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 MYBPC3Q14896 1274 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 MFSD5Q6N075 450 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 LHFPL2Q6ZUX7 228 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 PRPF38AQ8NAV1 312 aaKnown RBP3.21□□□□□ -1.9
LMNB1-207ENST00000494185 SYT8Q8NBV8 401 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 OR14C36Q8NHC7 312 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 ARL8AQ96BM9 186 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 MYL10Q9BUA6 226 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 OSBPL6Q9BZF3 934 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 PUS7LQ9H0K6 701 aaKnown RBP3.21□□□□□ -1.9
LMNB1-207ENST00000494185 SLC6A15Q9H2J7 730 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 DEF6Q9H4E7 631 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 MTG2Q9H4K7 406 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 AURKAIP1Q9NWT8 199 aaPredicted RBP3.21□□□□□ -1.9
LMNB1-207ENST00000494185 SMPD4Q9NXE4 827 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 SLC5A4Q9NY91 659 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 OAZ3Q9UMX2 235 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 CLCA2Q9UQC9 943 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 PHLDB1Q86UU1 1377 aa3.21□□□□□ -1.9
LMNB1-207ENST00000494185 A0A1W2PRX2 142 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 MTSS1O43312 755 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 SLC26A4O43511 780 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 B4GALT3O60512 393 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 FOXD2O60548 495 aaPredicted RBP3.2□□□□□ -1.9
LMNB1-207ENST00000494185 OPHN1O60890 802 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 PRKD3O94806 890 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 GUCY2FP51841 1108 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 WNT3AP56704 352 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 NOLC1Q14978 699 aaKnown RBP eCLIP3.2□□□□□ -1.9
LMNB1-207ENST00000494185 PCOLCEQ15113 449 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 ATP2B3Q16720 1220 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 PDZD4Q76G19 769 aaPredicted RBP3.2□□□□□ -1.9
LMNB1-207ENST00000494185 GPR155Q7Z3F1 870 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 POLNQ7Z5Q5 900 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 ADGRE4PQ86SQ3 457 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 CXorf67Q86X51 503 aaPredicted RBP3.2□□□□□ -1.9
LMNB1-207ENST00000494185 UNC5BQ8IZJ1 945 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 ANKRD35Q8N283 1001 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 NEIL1Q96FI4 390 aaPredicted RBP3.2□□□□□ -1.9
LMNB1-207ENST00000494185 AHCYL2Q96HN2 611 aaKnown RBP3.2□□□□□ -1.9
LMNB1-207ENST00000494185 ZNF496Q96IT1 587 aaPredicted RBP3.2□□□□□ -1.9
LMNB1-207ENST00000494185 LRRC37BQ96QE4 947 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 MPHOSPH9Q99550 1183 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 PITHD1Q9GZP4 211 aaPredicted RBP3.2□□□□□ -1.9
LMNB1-207ENST00000494185 EPC1Q9H2F5 836 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 MS4A5Q9H3V2 200 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 HOMER2Q9NSB8 354 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 SAP30BPQ9UHR5 308 aaKnown RBP3.2□□□□□ -1.9
LMNB1-207ENST00000494185 MRFAP1Q9Y605 127 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 NUMBLQ9Y6R0 609 aa3.2□□□□□ -1.9
LMNB1-207ENST00000494185 A0A0G2JLL6 359 aaPredicted RBP3.19□□□□□ -1.9
LMNB1-207ENST00000494185 LCHNA4D1U4 455 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 B8ZZF3 427 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 ELL2O00472 640 aaPredicted RBP3.19□□□□□ -1.9
LMNB1-207ENST00000494185 PHF2O75151 1096 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 CFBP00751 764 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 ITGB3P05106 788 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 RPLP2P05387 115 aaKnown RBP3.19□□□□□ -1.9
LMNB1-207ENST00000494185 COMTP21964 271 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 EVA1CP58658 441 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 TCIRG1Q13488 830 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 FAM50AQ14320 339 aaKnown RBP3.19□□□□□ -1.9
LMNB1-207ENST00000494185 TBC1D10BQ4KMP7 808 aaPredicted RBP3.19□□□□□ -1.9
LMNB1-207ENST00000494185 TRIM68Q6AZZ1 485 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 KANSL1Q7Z3B3 1105 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 FERMT3Q86UX7 667 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 CNTD1Q8N815 330 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.19□□□□□ -1.9
LMNB1-207ENST00000494185 SHCBP1Q8NEM2 672 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 COG1Q8WTW3 980 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 GAB3Q8WWW8 586 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 RABGGTAQ92696 567 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 MBD6Q96DN6 1003 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 MTMR8Q96EF0 704 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 OR14A2Q96R54 314 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 GPR20Q99678 358 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 ADAM7Q9H2U9 754 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 TOPORSQ9NS56 1045 aaPredicted RBP3.19□□□□□ -1.9
LMNB1-207ENST00000494185 CDC42EP3Q9UKI2 254 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 MYPNQ86TC9 1320 aa3.19□□□□□ -1.9
LMNB1-207ENST00000494185 A0A0A6YYJ9 748 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 PRSS38A1L453 326 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms