RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 RNF149Q8NC42 400 aa16.38■□□□□ 0.21
ATG4B-224ENST00000494132 MINDY3Q9H8M7 445 aa16.38■□□□□ 0.21
ATG4B-224ENST00000494132 ATP6V0A4Q9HBG4 840 aa16.38■□□□□ 0.21
ATG4B-224ENST00000494132 TUFT1Q9NNX1 390 aa16.38■□□□□ 0.21
ATG4B-224ENST00000494132 GPRC5CQ9NQ84 441 aa16.38■□□□□ 0.21
ATG4B-224ENST00000494132 ANKEF1Q9NU02 776 aa16.38■□□□□ 0.21
ATG4B-224ENST00000494132 UNC80Q8N2C7 3258 aa16.38■□□□□ 0.21
ATG4B-224ENST00000494132 REV3LO60673 3130 aa16.38■□□□□ 0.21
ATG4B-224ENST00000494132 TRANK1O15050 2925 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 SFPQP23246 707 aaKnown RBP eCLIP16.37■□□□□ 0.21
ATG4B-224ENST00000494132 CDC25AP30304 524 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 FXR2P51116 673 aaKnown RBP eCLIP16.37■□□□□ 0.21
ATG4B-224ENST00000494132 RILPL1Q5EBL4 403 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 CATSPER4Q7RTX7 472 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 CMTR2Q8IYT2 770 aaKnown RBP16.37■□□□□ 0.21
ATG4B-224ENST00000494132 ZNF710Q8N1W2 664 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 ERMNQ8TAM6 284 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 ASAP3Q8TDY4 903 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 TCP11Q8WWU5 503 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 SAMD11Q96NU1 681 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 POLR3CQ9BUI4 534 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-224ENST00000494132 LRWD1Q9UFC0 647 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 PIN4Q9Y237 131 aaKnown RBP16.37■□□□□ 0.21
ATG4B-224ENST00000494132 PPME1Q9Y570 386 aa16.37■□□□□ 0.21
ATG4B-224ENST00000494132 H3BNC9 293 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 DGAT1O75907 488 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 POU3F3P20264 500 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-224ENST00000494132 RPA1P27694 616 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 BMPR1AP36894 532 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 CDC42EP1Q00587 391 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 HAUS3Q68CZ6 603 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 TWF2Q6IBS0 349 aaKnown RBP16.36■□□□□ 0.21
ATG4B-224ENST00000494132 ECHDC2Q86YB7 292 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 SNX29Q8TEQ0 813 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 POLR3FQ9H1D9 316 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-224ENST00000494132 POLD4Q9HCU8 107 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 RNF19AQ9NV58 838 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 TMEM161AQ9NX61 479 aa16.36■□□□□ 0.21
ATG4B-224ENST00000494132 TDRD15B5MCY1 1934 aaKnown RBP16.36■□□□□ 0.21
ATG4B-224ENST00000494132 K7ELQ4 463 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-224ENST00000494132 GAS2O43903 313 aaKnown RBP16.35■□□□□ 0.21
ATG4B-224ENST00000494132 FAM189BP81408 668 aa16.35■□□□□ 0.21
ATG4B-224ENST00000494132 CAPSQ13938 189 aa16.35■□□□□ 0.21
ATG4B-224ENST00000494132 ZRSR1Q15695 479 aaKnown RBP16.35■□□□□ 0.21
ATG4B-224ENST00000494132 SPOUT1Q5T280 376 aaKnown RBP16.35■□□□□ 0.21
ATG4B-224ENST00000494132 EXOC8Q8IYI6 725 aa16.35■□□□□ 0.21
ATG4B-224ENST00000494132 IGSF22Q8N9C0 903 aa16.35■□□□□ 0.21
ATG4B-224ENST00000494132 CLP1Q92989 425 aaKnown RBP16.35■□□□□ 0.21
ATG4B-224ENST00000494132 LPPQ93052 612 aa16.35■□□□□ 0.21
ATG4B-224ENST00000494132 NACC1Q96RE7 527 aa16.35■□□□□ 0.21
ATG4B-224ENST00000494132 INO80BQ9C086 356 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-224ENST00000494132 ALG13Q9NP73 1137 aaKnown RBP16.35■□□□□ 0.21
ATG4B-224ENST00000494132 KIAA1024Q9UPX6 916 aa16.35■□□□□ 0.21
ATG4B-224ENST00000494132 ARHGEF35A5YM69 484 aa16.34■□□□□ 0.21
ATG4B-224ENST00000494132 VWA3AA6NCI4 1184 aa16.34■□□□□ 0.21
ATG4B-224ENST00000494132 GRM6O15303 877 aa16.34■□□□□ 0.21
ATG4B-224ENST00000494132 ATF7P17544 494 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-224ENST00000494132 GLRA2P23416 452 aa16.34■□□□□ 0.21
ATG4B-224ENST00000494132 ATP2C1P98194 919 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-224ENST00000494132 CLLU1OSQ5K130 101 aa16.34■□□□□ 0.21
ATG4B-224ENST00000494132 DTHD1Q6ZMT9 781 aa16.34■□□□□ 0.21
ATG4B-224ENST00000494132 HELQQ8TDG4 1101 aa16.34■□□□□ 0.21
ATG4B-224ENST00000494132 ELAC1Q9H777 363 aaKnown RBP16.34■□□□□ 0.21
ATG4B-224ENST00000494132 DDX19AQ9NUU7 478 aaKnown RBP16.34■□□□□ 0.21
ATG4B-224ENST00000494132 TYW1Q9NV66 732 aaKnown RBP16.34■□□□□ 0.21
ATG4B-224ENST00000494132 DACT1Q9NYF0 836 aa16.34■□□□□ 0.21
ATG4B-224ENST00000494132 THEGQ9P2T0 379 aa16.34■□□□□ 0.21
ATG4B-224ENST00000494132 DBR1Q9UK59 544 aaKnown RBP16.34■□□□□ 0.21
ATG4B-224ENST00000494132 MEIS3P2A8K0S8 358 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 E9PMD0 336 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 C5orf67F2Z3F1 127 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 INO80B-WBP1J3KQ70 363 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 XRCC6P12956 609 aaKnown RBP eCLIP16.33■□□□□ 0.2
ATG4B-224ENST00000494132 ARL2P36404 184 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 PRPHP41219 470 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 PHKA2P46019 1235 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 TFF2Q03403 129 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 FAM173BQ6P4H8 233 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 PADI6Q6TGC4 694 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 SRGAP1Q7Z6B7 1085 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 MRPL38Q96DV4 380 aaKnown RBP16.33■□□□□ 0.2
ATG4B-224ENST00000494132 CPB2Q96IY4 423 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 PLIN2Q99541 437 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 RAB34Q9BZG1 259 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 BHMT2Q9H2M3 363 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 AGPAT5Q9NUQ2 364 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 RWDD3Q9Y3V2 267 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 TRIP11Q15643 1979 aa16.33■□□□□ 0.2
ATG4B-224ENST00000494132 A0A0U1RQF3 1178 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 LRRIQ4A6NIV6 560 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 LAD1O00515 517 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 ASAP2O43150 1006 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 ITGB1P05556 798 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 SYT1P21579 422 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 PBX3P40426 434 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 PTENP60484 403 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 TFDP1Q14186 410 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 PDIA5Q14554 519 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 MXD4Q14582 209 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-224ENST00000494132 KRT79Q5XKE5 535 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms