RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 DEFB118Q96PH6 123 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 STRA6Q9BX79 667 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 ST6GALNAC4Q9H4F1 302 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 SUCLA2Q9P2R7 463 aaPredicted RBP12.58□□□□□ -0.4
MCF2L-231ENST00000494043 HDAC6Q9UBN7 1215 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 RWDD2AQ9UIY3 292 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 GOLGA6L3A6NEY3 463 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 CCDC169A6NNP5 214 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 KBTBD13C9JR72 458 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 IKBKBO14920 756 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 SLC16A4O15374 487 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 GNAT1P11488 350 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 CCNE1P24864 410 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 TMOD1P28289 359 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 MYL5Q02045 173 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 LAMTOR4Q0VGL1 99 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 CAPSQ13938 189 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 HIC1Q14526 733 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 MXD4Q14582 209 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-231ENST00000494043 L1TD1Q5T7N2 865 aaKnown RBP12.57□□□□□ -0.4
MCF2L-231ENST00000494043 LUZP1Q86V48 1076 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 SESTD1Q86VW0 696 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 DHX40Q8IX18 779 aaKnown RBP12.57□□□□□ -0.4
MCF2L-231ENST00000494043 TMEM161BQ8NDZ6 487 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 ZNF507Q8TCN5 953 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 P2RX5Q93086 422 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 MED15Q96RN5 788 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 NTPCRQ9BSD7 190 aaKnown RBP12.57□□□□□ -0.4
MCF2L-231ENST00000494043 KIFC3Q9BVG8 833 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 KMT5AQ9NQR1 393 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 ARHGAP28Q9P2N2 729 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 KCNG1Q9UIX4 513 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 OGDHLQ9ULD0 1010 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 PHF24Q9UPV7 400 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 PCDHB13Q9Y5F0 798 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 MYH11P35749 1972 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 ADGRA3Q8IWK6 1321 aa12.57□□□□□ -0.4
MCF2L-231ENST00000494043 SMIM35A0A1B0GVV1 85 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 A0A1W2PQ45 241 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-231ENST00000494043 A0A1W2PQY0 241 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 BICDL2A1A5D9 508 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 LRRIQ4A6NIV6 560 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 SMTNL1A8MU46 457 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 BECN2A8MW95 431 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 H0YCG3 227 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 DNM1LO00429 736 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 PRPF6O94906 941 aaKnown RBP12.56□□□□□ -0.4
MCF2L-231ENST00000494043 SCP2P22307 547 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 ABCD1P33897 745 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 HOXD13P35453 343 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 STX17P56962 302 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 GTF2BQ00403 316 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 ZC2HC1CQ53FD0 456 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-231ENST00000494043 CENPPQ6IPU0 288 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 RUFY4Q6ZNE9 571 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 HAUS6Q7Z4H7 955 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 DEPTORQ8TB45 409 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 ENOX1Q8TC92 643 aaKnown RBP12.56□□□□□ -0.4
MCF2L-231ENST00000494043 KCNN1Q92952 543 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 HVCN1Q96D96 273 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 GLT1D1Q96MS3 346 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 MAP7D2Q96T17 732 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 PRDM10Q9NQV6 1147 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 GTF2IRD1Q9UHL9 959 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 AKT3Q9Y243 479 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 GRIN2DO15399 1336 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 ZMYM2Q9UBW7 1377 aa12.56□□□□□ -0.4
MCF2L-231ENST00000494043 DENND3A2RUS2 1198 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 TRIM49BA6NDI0 452 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 ASAP2O43150 1006 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 TREHO43280 583 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 GJB1P08034 283 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 CYP2C9P11712 490 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 PMS1P54277 932 aaKnown RBP12.55□□□□□ -0.4
MCF2L-231ENST00000494043 ZNF200P98182 395 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-231ENST00000494043 PTPN11Q06124 597 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-231ENST00000494043 KCNA1Q09470 495 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 ITGA7Q13683 1181 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 TFDP1Q14186 410 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 NCAPHQ15003 741 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 KNOP1Q1ED39 458 aaKnown RBP12.55□□□□□ -0.4
MCF2L-231ENST00000494043 ZCWPW2Q504Y3 356 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 FAM47CQ5HY64 1035 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 SPATA1Q5VX52 437 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 CDCA2Q69YH5 1023 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-231ENST00000494043 GDF6Q6KF10 455 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-231ENST00000494043 TTI2Q6NXR4 508 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 FOXR2Q6PJQ5 311 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 RHPN2Q8IUC4 686 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 KSR1Q8IVT5 923 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 KIAA0319LQ8IZA0 1049 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 VTI1AQ96AJ9 217 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 ACCSQ96QU6 501 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 KCTD10Q9H3F6 313 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 SEMA6BQ9H3T3 888 aa12.55□□□□□ -0.4
MCF2L-231ENST00000494043 A0A0U1RQG5 324 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-231ENST00000494043 GOLGA6L19H0YKK7 550 aa12.54□□□□□ -0.4
MCF2L-231ENST00000494043 VTNP04004 478 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms