RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 BLZF1Q9H2G9 400 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 MRPL44Q9H9J2 332 aaKnown RBP16.47■□□□□ 0.23
ACTB-213ENST00000493945 KMT5AQ9NQR1 393 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 DACH1Q9UI36 760 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 UBE4BO95155 1302 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 FRMD3A2A2Y4 597 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 TRAK2O60296 914 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 CD4P01730 458 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 LAMTOR4Q0VGL1 99 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 DPYDQ12882 1025 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 STRN3Q13033 797 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 COASYQ13057 564 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 PNOCQ13519 176 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 CUL4BQ13620 913 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 HSP90AA2PQ14568 343 aaPredicted RBP16.46■□□□□ 0.23
ACTB-213ENST00000493945 ARSHQ5FYA8 562 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 FAM26FQ5R3K3 315 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 CAVIN1Q6NZI2 390 aaKnown RBP16.46■□□□□ 0.23
ACTB-213ENST00000493945 APBB1IPQ7Z5R6 666 aaPredicted RBP16.46■□□□□ 0.23
ACTB-213ENST00000493945 SRGAP1Q7Z6B7 1085 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 KIAA0319LQ8IZA0 1049 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 RNF149Q8NC42 400 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 NFKBIZQ9BYH8 718 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 TRPV6Q9H1D0 765 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 HIPK3Q9H422 1215 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 TMEM39AQ9NV64 488 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 EXOC7Q9UPT5 735 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 PCDHB13Q9Y5F0 798 aa16.46■□□□□ 0.23
ACTB-213ENST00000493945 TANC1Q9C0D5 1861 aa16.46■□□□□ 0.22
ACTB-213ENST00000493945 ERLIN2O94905 339 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 VTNP04004 478 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 SELPP16109 830 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 CRYBB1P53674 252 aaPredicted RBP16.45■□□□□ 0.22
ACTB-213ENST00000493945 PEX3P56589 373 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 NLRP11P59045 1033 aaKnown RBP16.45■□□□□ 0.22
ACTB-213ENST00000493945 ZNF200P98182 395 aaPredicted RBP16.45■□□□□ 0.22
ACTB-213ENST00000493945 CAMK4Q16566 473 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 TMEM132AQ24JP5 1023 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 LRRC26Q2I0M4 334 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 SASS6Q6UVJ0 657 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 RUFY4Q6ZNE9 571 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 UBE2Q1Q7Z7E8 422 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 GRAMD1CQ8IYS0 662 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 LRRC15Q8TF66 581 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 DNAJC19Q96DA6 116 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 CELF4Q9BZC1 486 aaKnown RBP16.45■□□□□ 0.22
ACTB-213ENST00000493945 GPRC5CQ9NQ84 441 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 PRDM5Q9NQX1 630 aaPredicted RBP16.45■□□□□ 0.22
ACTB-213ENST00000493945 KIAA1468Q9P260 1216 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 GINS2Q9Y248 185 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 SQORQ9Y6N5 450 aa16.45■□□□□ 0.22
ACTB-213ENST00000493945 NPHP3-ACAD11A0A0J9YXS1 232 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 RSPH10B2B2RC85 870 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 EVI5O60447 810 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 RHOBTB3O94955 611 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 GCNT3O95395 438 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 RSPH10BP0C881 870 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 GLRA2P23416 452 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 RFC2P35250 354 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 GPC3P51654 580 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
ACTB-213ENST00000493945 MAPK7Q13164 816 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 CAPSQ13938 189 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 MAPK6Q16659 721 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 LRRC8DQ7L1W4 858 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 SFR1Q86XK3 245 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 PRIMPOLQ96LW4 560 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 PRMT7Q9NVM4 692 aaPredicted RBP16.44■□□□□ 0.22
ACTB-213ENST00000493945 NR2E3Q9Y5X4 410 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 CDY2AQ9Y6F7 541 aa16.44■□□□□ 0.22
ACTB-213ENST00000493945 INO80B-WBP1J3KQ70 363 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 EIF3DO15371 548 aaKnown RBP eCLIP16.43■□□□□ 0.22
ACTB-213ENST00000493945 CTSHP09668 335 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 CKBP12277 381 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 RAG1P15918 1043 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 NPTX2P47972 431 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 NCKAP1LP55160 1127 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 MDM2Q00987 491 aaPredicted RBP16.43■□□□□ 0.22
ACTB-213ENST00000493945 KMT5BQ4FZB7 885 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 NT5DC1Q5TFE4 455 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 CDCA2Q69YH5 1023 aaPredicted RBP16.43■□□□□ 0.22
ACTB-213ENST00000493945 IFNLR1Q8IU57 520 aaPredicted RBP16.43■□□□□ 0.22
ACTB-213ENST00000493945 ASAP3Q8TDY4 903 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 PPP1R13LQ8WUF5 828 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 NTPCRQ9BSD7 190 aaKnown RBP16.43■□□□□ 0.22
ACTB-213ENST00000493945 ST6GALNAC4Q9H4F1 302 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 TMEM134Q9H6X4 195 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 TMEM206Q9H813 350 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 PCDHA5Q9Y5H7 936 aa16.43■□□□□ 0.22
ACTB-213ENST00000493945 K7ERI5 159 aa16.42■□□□□ 0.22
ACTB-213ENST00000493945 GPR182O15218 404 aa16.42■□□□□ 0.22
ACTB-213ENST00000493945 PRR29P0C7W0 189 aa16.42■□□□□ 0.22
ACTB-213ENST00000493945 EIF4BP23588 611 aaKnown RBP16.42■□□□□ 0.22
ACTB-213ENST00000493945 PTENP60484 403 aa16.42■□□□□ 0.22
ACTB-213ENST00000493945 FAAP100Q0VG06 881 aa16.42■□□□□ 0.22
ACTB-213ENST00000493945 KIZQ2M2Z5 673 aa16.42■□□□□ 0.22
ACTB-213ENST00000493945 FAM26DQ5JW98 314 aa16.42■□□□□ 0.22
ACTB-213ENST00000493945 ZNF658Q5TYW1 1059 aaPredicted RBP16.42■□□□□ 0.22
ACTB-213ENST00000493945 DAW1Q8N136 415 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms