RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PARVBQ9HBI1 364 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 MAD2L2Q9UI95 211 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ZFYVE9O95405 1425 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 HOXB7P09629 217 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 HSPA2P54652 639 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 PPP2R2AP63151 447 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 ACTN3Q08043 901 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 MKRN3Q13064 507 aaKnown RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 ADCK5Q3MIX3 580 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 DCAF4L1Q3SXM0 396 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 SLFN12LQ6IEE8 588 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 CLEC4FQ8N1N0 589 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 SUCLG2Q96I99 432 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 PANX2Q96RD6 677 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 EXOSC4Q9NPD3 245 aaKnown RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 NGRNQ9NPE2 291 aaKnown RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 AIPL1Q9NZN9 384 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 GOLGA8IPA6NC78 632 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 MYO1GB0I1T2 1018 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 BTBD18B2RXH4 712 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 NDUFA10O95299 355 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 PSAPP07602 524 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 FBLN1P23142 703 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 ANO4Q32M45 955 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 NAALADL2Q58DX5 795 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 OLFML2BQ68BL8 750 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.35□□□□□ -1.076e-6■■□□□ 12.9
BRCA1-221ENST00000493795 WWP1Q9H0M0 922 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 FOXP1Q9H334 677 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 C6orf203Q9P0P8 240 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 NBPF26B4DH59 902 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 NFIBO00712 420 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 MEFVO15553 781 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 RHOBTB1O94844 696 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 KRT17Q04695 432 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 KRR1Q13601 381 aaKnown RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 FASTKD1Q53R41 847 aaKnown RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 SLC10A5Q5PT55 438 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 CCDC103Q8IW40 242 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 MFN1Q8IWA4 741 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 NBPF15Q8N660 670 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 SH3TC2Q8TF17 1288 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 CYGBQ8WWM9 190 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 SIKE1Q9BRV8 207 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 MSTO1Q9BUK6 570 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 SMARCAD1Q9H4L7 1026 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 CCDC134Q9H6E4 229 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 TK2O00142 265 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 STXBP3O00186 592 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 CLK1P49759 484 aaKnown RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 BFSP2Q13515 415 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 DPY19L2Q6NUT2 758 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 PPP4R3CPQ6ZMV5 832 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 SULF1Q8IWU6 871 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 PPM1NQ8N819 430 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 BBS2Q9BXC9 721 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 SPTLC3Q9NUV7 552 aa8.35□□□□□ -1.07
BRCA1-221ENST00000493795 POLR3AO14802 1390 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-221ENST00000493795 EIF4E1BA6NMX2 242 aaKnown RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 AKAP10O43572 662 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 PGM1P36871 562 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 BTDP43251 543 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 CENPAP49450 140 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 SNAP25P60880 206 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 OSTNP61366 133 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 PRAMEP78395 509 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 CNGA2Q16280 664 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 MEI1Q5TIA1 1274 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 IYDQ6PHW0 289 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 KRT77Q7Z794 578 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 NLRP14Q86W24 1093 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 SP110Q9HB58 689 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 SNX24Q9Y343 169 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 SUPT3HB4E1H0 165 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 CYTH3O43739 400 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 MAGOHP61326 146 aaKnown RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 KRT31Q15323 416 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 KRT24Q2M2I5 525 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 GPATCH4Q5T3I0 446 aaKnown RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 ZNF790Q6PG37 636 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 SARM1Q6SZW1 724 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 TOGARAM2Q6ZUX3 1019 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 CDKL3Q8IVW4 592 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 RFWD2Q8NHY2 731 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 ARL8AQ96BM9 186 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 MTMR6Q9Y217 621 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 ADCY9O60503 1353 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 UBA6A0AVT1 1052 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 MAP3K13O43283 966 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 DLGAP3O95886 979 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 LDHAP00338 332 aaKnown RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 CALB1P05937 261 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 CDC27P30260 824 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 HMOX2P30519 316 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 CACNB1Q02641 598 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 PRKCQQ04759 706 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 MB21D1Q8N884 522 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 SCFD1Q8WVM8 642 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 TRIM63Q969Q1 353 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms