RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 C17orf75Q9HAS0 396 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 MYOZ2Q9NPC6 264 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 AMFRQ9UKV5 643 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 TTC7AQ9ULT0 858 aaPredicted RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 USP20Q9Y2K6 914 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 SAMM50Q9Y512 469 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 ZHX2Q9Y6X8 837 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 NCANO14594 1321 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 GOLGA6CA6NDK9 693 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 PHF20L1A8MW92 1017 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 TMCO5BA8MYB1 307 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 WDR64B1ANS9 1081 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 DDX3XO00571 662 aaKnown RBP eCLIP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 DHX15O43143 795 aaKnown RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 GOLGA6DP0CG33 693 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 MYBL2P10244 700 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 ALAS1P13196 640 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 INPP5BP32019 993 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 RARRES1P49788 294 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 SMTNP53814 917 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 MCCD1P59942 119 aaPredicted RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 TGFB2P61812 414 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 GTF2BQ00403 316 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 ENPEPQ07075 957 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 CXCL9Q07325 125 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 RASA3Q14644 834 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 KIF22Q14807 665 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 MAATS1Q7Z4T9 603 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 XXYLT1Q8NBI6 393 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 C1orf131Q8NDD1 294 aaKnown RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 CCDC26Q8TAB7 109 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 SYTL5Q8TDW5 730 aaPredicted RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 SCFD2Q8WU76 684 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 HDAC7Q8WUI4 952 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 MS4A14Q96JA4 679 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 SLITRK6Q9H5Y7 841 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 GOLGA6AQ9NYA3 693 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 WRAP73Q9P2S5 460 aaPredicted RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 PPP1R9AQ9ULJ8 1098 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 PFASO15067 1338 aa10.48□□□□□ -0.73
NPHP3-209ENST00000493732 ZC3H4Q9UPT8 1303 aaKnown RBP10.48□□□□□ -0.73
NPHP3-209ENST00000493732 ANKRD62A6NC57 917 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 TULP1O00294 542 aaPredicted RBP10.47□□□□□ -0.73
NPHP3-209ENST00000493732 ZBTB39O15060 712 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 CEP104O60308 925 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 PHACTR2O75167 634 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 DPEP1P16444 411 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 SCP2P22307 547 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 YWHABP31946 246 aaKnown RBP10.47□□□□□ -0.73
NPHP3-209ENST00000493732 VAMP7P51809 220 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 GALCP54803 685 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 HADHBP55084 474 aaKnown RBP10.47□□□□□ -0.73
NPHP3-209ENST00000493732 HNRNPH2P55795 449 aaKnown RBP10.47□□□□□ -0.73
NPHP3-209ENST00000493732 ZNF280AP59817 542 aaPredicted RBP10.47□□□□□ -0.73
NPHP3-209ENST00000493732 SLC7A5Q01650 507 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 GUCY2DQ02846 1103 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 TCEAL1Q15170 157 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 SAMD1Q6SPF0 538 aaPredicted RBP10.47□□□□□ -0.73
NPHP3-209ENST00000493732 OTUD6AQ7L8S5 288 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 RBBP6Q7Z6E9 1792 aaKnown RBP10.47□□□□□ -0.73
NPHP3-209ENST00000493732 DAAM2Q86T65 1068 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 GPIHBP1Q8IV16 184 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 HOMEZQ8IX15 550 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 DAW1Q8N136 415 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 RASGEF1CQ8N431 466 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 FAM81BQ96LP2 452 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 KRT12Q99456 494 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 SH3GL2Q99962 352 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 AS3MTQ9HBK9 375 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 EPB41L5Q9HCM4 733 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 PIM2Q9P1W9 311 aa10.47□□□□□ -0.73
NPHP3-209ENST00000493732 H0YCG3 227 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 NFIBO00712 420 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 KCNA3P22001 575 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 OAZ1P54368 228 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 GYS2P54840 703 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 EN1Q05925 392 aaPredicted RBP10.46□□□□□ -0.73
NPHP3-209ENST00000493732 CFAP58Q5T655 872 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 DCAF15Q66K64 600 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 HAUS6Q7Z4H7 955 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 NLRX1Q86UT6 975 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 MORC4Q8TE76 937 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 LRRC45Q96CN5 670 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 HES6Q96HZ4 224 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 CDHR1Q96JP9 859 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 ISCUQ9H1K1 167 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 TAF1DQ9H5J8 278 aaPredicted RBP10.46□□□□□ -0.73
NPHP3-209ENST00000493732 STXBP5LQ9Y2K9 1186 aa10.46□□□□□ -0.73
NPHP3-209ENST00000493732 MIF4GDA9UHW6 222 aaKnown RBP10.46□□□□□ -0.74
NPHP3-209ENST00000493732 AGPSO00116 658 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 DDX39AO00148 427 aaKnown RBP10.46□□□□□ -0.74
NPHP3-209ENST00000493732 GLI1P08151 1106 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 HSPA6P17066 643 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 NCKAP1LP55160 1127 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 COG2Q14746 738 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 PGM5Q15124 567 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 NBPF9Q3BBW0 867 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 CBWD6Q4V339 395 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 CBWD3Q5JTY5 395 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms