RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ZNF76P36508 570 aa13.67□□□□□ -0.22
UPF3A-210ENST00000493727 DEFB103AP81534 67 aa13.67□□□□□ -0.22
UPF3A-210ENST00000493727 CEBPZQ03701 1054 aaKnown RBP13.67□□□□□ -0.22
UPF3A-210ENST00000493727 DNM1Q05193 864 aaKnown RBP13.67□□□□□ -0.22
UPF3A-210ENST00000493727 NEDD9Q14511 834 aa13.67□□□□□ -0.22
UPF3A-210ENST00000493727 TCTN1Q2MV58 587 aa13.67□□□□□ -0.22
UPF3A-210ENST00000493727 HSDL1Q3SXM5 330 aa13.67□□□□□ -0.22
UPF3A-210ENST00000493727 TTC38Q5R3I4 469 aa13.67□□□□□ -0.22
UPF3A-210ENST00000493727 XRRA1Q6P2D8 792 aa13.67□□□□□ -0.22
UPF3A-210ENST00000493727 Q6ZVU0 165 aa13.67□□□□□ -0.22
UPF3A-210ENST00000493727 TMCO2Q7Z6W1 182 aaPredicted RBP13.67□□□□□ -0.22
UPF3A-210ENST00000493727 IL31RAQ8NI17 732 aa13.67□□□□□ -0.22
UPF3A-210ENST00000493727 NAP1L4Q99733 375 aaKnown RBP13.67□□□□□ -0.22
UPF3A-210ENST00000493727 CFAP45Q9UL16 551 aa13.67□□□□□ -0.22
UPF3A-210ENST00000493727 FAM86C2PA6NEL3 165 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 PI4K2BG5E9Z4 385 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 CCNT1O60563 726 aaKnown RBP13.66□□□□□ -0.22
UPF3A-210ENST00000493727 GJB5O95377 273 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 SREBF1P36956 1147 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 ARHGAP4P98171 946 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 CBLBQ13191 982 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 IKBKEQ14164 716 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 ATL3Q6DD88 541 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 TRIM46Q7Z4K8 759 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 MEIOBQ8N635 442 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 INPP4AQ96PE3 977 aaPredicted RBP13.66□□□□□ -0.22
UPF3A-210ENST00000493727 SUGCTQ9HAC7 445 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 ATP13A2Q9NQ11 1180 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 CEP131Q9UPN4 1083 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 ATG2AQ2TAZ0 1938 aa13.66□□□□□ -0.22
UPF3A-210ENST00000493727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.65□□□□□ -0.22
UPF3A-210ENST00000493727 H3BRB1 525 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 FIBPO43427 364 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 NBNO60934 754 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 GNAT1P11488 350 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 MCM7P33993 719 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 ERVK-21P61565 698 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 SP2Q02086 613 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 STK38Q15208 465 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 ZNF174Q15697 407 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 TRIM71Q2Q1W2 868 aaKnown RBP13.65□□□□□ -0.22
UPF3A-210ENST00000493727 METTL7BQ6UX53 244 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 SERINC5Q86VE9 423 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 GIMAP8Q8ND71 665 aaPredicted RBP13.65□□□□□ -0.22
UPF3A-210ENST00000493727 USP28Q96RU2 1077 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 C16orf70Q9BSU1 422 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 TUT1Q9H6E5 874 aaKnown RBP13.65□□□□□ -0.22
UPF3A-210ENST00000493727 UBE2ZQ9H832 354 aaPredicted RBP13.65□□□□□ -0.22
UPF3A-210ENST00000493727 TFIP11Q9UBB9 837 aaKnown RBP13.65□□□□□ -0.22
UPF3A-210ENST00000493727 ZNF215Q9UL58 517 aaPredicted RBP13.65□□□□□ -0.22
UPF3A-210ENST00000493727 PCDHB11Q9Y5F2 797 aa13.65□□□□□ -0.22
UPF3A-210ENST00000493727 NLRC5Q86WI3 1866 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 C17orf102A2RUQ5 167 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 LINC01553A4QN01 128 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 GOLGA6L22H0YM25 854 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 RBAK-RBAKDNI3L0D1 243 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 CAND2O75155 1236 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
UPF3A-210ENST00000493727 BMP15O95972 392 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 LGALS2P05162 132 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 USP11P51784 963 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 SF3A1Q15459 793 aaKnown RBP13.64□□□□□ -0.23
UPF3A-210ENST00000493727 ZNF618Q5T7W0 954 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 PCNX4Q63HM2 1172 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 NLRX1Q86UT6 975 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 RNF135Q8IUD6 432 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 ATP6V0A1Q93050 837 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 CHAMP1Q96JM3 812 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 RAD9AQ99638 391 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 SENP7Q9BQF6 1050 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 CLIC4Q9Y696 253 aa13.64□□□□□ -0.23
UPF3A-210ENST00000493727 RSPH10B2B2RC85 870 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 MARCH6O60337 910 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 SORBS3O60504 671 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 LGR5O75473 907 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 TDP2O95551 362 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 RSPH10BP0C881 870 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 GCFC2P16383 781 aaKnown RBP13.63□□□□□ -0.23
UPF3A-210ENST00000493727 HOXC8P31273 242 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 THPOP40225 353 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 TOB1P50616 345 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-210ENST00000493727 MRPS9P82933 396 aaKnown RBP13.63□□□□□ -0.23
UPF3A-210ENST00000493727 MBTPS1Q14703 1052 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 LEXMQ3ZCV2 418 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 GLMNQ92990 594 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 CDHR1Q96JP9 859 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 SPATA32Q96LK8 384 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 TGS1Q96RS0 853 aaKnown RBP13.63□□□□□ -0.23
UPF3A-210ENST00000493727 SCAND2PQ9GZW5 306 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-210ENST00000493727 DDX25Q9UHL0 483 aaKnown RBP13.63□□□□□ -0.23
UPF3A-210ENST00000493727 PCDHB6Q9Y5E3 794 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 COL4A6Q14031 1691 aa13.63□□□□□ -0.23
UPF3A-210ENST00000493727 PRR33A8MZF0 331 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 NEMFO60524 1076 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 YEATS4O95619 227 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 CYP3A4P08684 503 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 SMIM10L2AP0DMW4 78 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 SMIM10L2BP0DMW5 78 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms