RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 WDR75Q8IWA0 830 aaKnown RBP17.42■□□□□ 0.38
BRAT1-206ENST00000493232 ZNF526Q8TF50 670 aaPredicted RBP17.42■□□□□ 0.38
BRAT1-206ENST00000493232 HERC5Q9UII4 1024 aaKnown RBP17.42■□□□□ 0.38
BRAT1-206ENST00000493232 KPNA7A9QM74 516 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 ORC4O43929 436 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 BNIP3LO60238 219 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 TRIM72Q6ZMU5 477 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 MAML1Q92585 1016 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 FSD1LQ9BXM9 530 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 NFU1Q9UMS0 254 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 TMEM247A6NEH6 219 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 CYP19A1P11511 503 aaPredicted RBP17.41■□□□□ 0.38
BRAT1-206ENST00000493232 USP11P51784 963 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 GPSM2P81274 684 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 ZNF394Q53GI3 561 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 CELF1Q92879 486 aaKnown RBP17.41■□□□□ 0.38
BRAT1-206ENST00000493232 DCTN3O75935 186 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 STAT3P40763 770 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 SYNE4Q8N205 404 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 ISCA1Q9BUE6 129 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 LRRC53A6NM62 1247 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 SLC7A5Q01650 507 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 TRAIPQ9BWF2 469 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 INPP5FQ9Y2H2 1132 aa17.41■□□□□ 0.38
BRAT1-206ENST00000493232 A0A087WUV0 522 aaPredicted RBP17.4■□□□□ 0.38
BRAT1-206ENST00000493232 KRT7P08729 469 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 IFNA8P32881 189 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 FRA10AC1Q70Z53 315 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 LRRC43Q8N309 656 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 IFT43Q96FT9 208 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 TRIM62Q9BVG3 475 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 RRP15Q9Y3B9 282 aaKnown RBP17.4■□□□□ 0.38
BRAT1-206ENST00000493232 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 WDR91A4D1P6 747 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 POTECB2RU33 542 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 F5H6K3 240 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 KLRC3Q07444 240 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 DRP2Q13474 957 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 QRICH1Q2TAL8 776 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 NAALADL2Q58DX5 795 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 FAM133BQ5BKY9 247 aaKnown RBP17.4■□□□□ 0.38
BRAT1-206ENST00000493232 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 GCOM2Q9BZD3 368 aaPredicted RBP17.4■□□□□ 0.38
BRAT1-206ENST00000493232 ABCB6Q9NP58 842 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 OLA1Q9NTK5 396 aaKnown RBP17.4■□□□□ 0.38
BRAT1-206ENST00000493232 GABBR1Q9UBS5 961 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 IP6K2Q9UHH9 426 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 HOXD10P28358 340 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 PRCPP42785 496 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 CLCN6P51797 869 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 HP1BP3Q5SSJ5 553 aaPredicted RBP17.4■□□□□ 0.38
BRAT1-206ENST00000493232 SCN4BQ8IWT1 228 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 GUF1Q8N442 669 aaKnown RBP17.4■□□□□ 0.38
BRAT1-206ENST00000493232 CDC26Q8NHZ8 85 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 MAP3K7O43318 606 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 MMP19Q99542 508 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 PREX2Q70Z35 1606 aa17.4■□□□□ 0.38
BRAT1-206ENST00000493232 SP8Q8IXZ3 490 aa17.39■□□□□ 0.38
BRAT1-206ENST00000493232 C11orf70Q9BRQ4 267 aa17.39■□□□□ 0.38
BRAT1-206ENST00000493232 TRIM55Q9BYV6 548 aa17.39■□□□□ 0.38
BRAT1-206ENST00000493232 INTS2Q9H0H0 1204 aaKnown RBP17.39■□□□□ 0.38
BRAT1-206ENST00000493232 POLR3FQ9H1D9 316 aaPredicted RBP17.39■□□□□ 0.38
BRAT1-206ENST00000493232 KRT82Q9NSB4 513 aa17.39■□□□□ 0.38
BRAT1-206ENST00000493232 PLA2R1Q13018 1463 aa17.39■□□□□ 0.38
BRAT1-206ENST00000493232 ABCC3O15438 1527 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 SKIP12755 728 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 KRT80Q6KB66 452 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 KCNV1Q6PIU1 500 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 NEDD1Q8NHV4 660 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 MRPL46Q9H2W6 279 aaKnown RBP17.39■□□□□ 0.37
BRAT1-206ENST00000493232 PNPLA7Q6ZV29 1317 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 TRIM49BA6NDI0 452 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 M0QYV0 167 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 SNX2O60749 519 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 APOEP02649 317 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 TMPRSS15P98073 1019 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 FSCBQ5H9T9 825 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 SWSAP1Q6NVH7 229 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 ALDH8A1Q9H2A2 487 aaPredicted RBP17.39■□□□□ 0.37
BRAT1-206ENST00000493232 DDX56Q9NY93 547 aaKnown RBP17.39■□□□□ 0.37
BRAT1-206ENST00000493232 PLAAQ9Y263 795 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 FCER1AP12319 257 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 SPP2Q13103 211 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 ZNF564Q8TBZ8 553 aaPredicted RBP17.39■□□□□ 0.37
BRAT1-206ENST00000493232 ASB14A6NK59 587 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 CFLARO15519 480 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 CSPG5O95196 566 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 SMARCA1P28370 1054 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 TXNRD1Q16881 649 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 ITPRIPL1Q6GPH6 555 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 ADGRF4Q8IZF3 695 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 SLC44A5Q8NCS7 719 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 TRIM4Q9C037 500 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 SNX24Q9Y343 169 aa17.39■□□□□ 0.37
BRAT1-206ENST00000493232 KDM6BO15054 1643 aa17.38■□□□□ 0.37
BRAT1-206ENST00000493232 RHPN2Q8IUC4 686 aa17.38■□□□□ 0.37
BRAT1-206ENST00000493232 EXT2Q93063 718 aa17.38■□□□□ 0.37
BRAT1-206ENST00000493232 G3BP2Q9UN86 482 aaKnown RBP17.38■□□□□ 0.37
BRAT1-206ENST00000493232 GRID2IPA4D2P6 1211 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms