RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 SFI1A8K8P3 1242 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 VWA5AO00534 786 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 OPLAHO14841 1288 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 INPPL1O15357 1258 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 SRGAP2O75044 1071 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 PPP1R2P41236 205 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 STAT2P52630 851 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 SEMA3FQ13275 785 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 MAN2A1Q16706 1144 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 LRRC55Q6ZSA7 311 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 CCDC65Q8IXS2 484 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 GOLGA1Q92805 767 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 CAPZA3Q96KX2 299 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 CCDC42Q96M95 316 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 PARD6BQ9BYG5 372 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 LMAN2LQ9H0V9 348 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 KDM3AQ9Y4C1 1321 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 RSPH10B2B2RC85 870 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 RSPH10BP0C881 870 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 CYLC1P35663 651 aaPredicted RBP7.7□□□□□ -1.18
HERC4-211ENST00000492996 CASP5P51878 434 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 ARID5AQ03989 594 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 GPS2Q13227 327 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 TTC31Q49AM3 519 aaPredicted RBP7.7□□□□□ -1.18
HERC4-211ENST00000492996 ARSHQ5FYA8 562 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 TRMT1LQ7Z2T5 733 aaKnown RBP7.7□□□□□ -1.18
HERC4-211ENST00000492996 CACNA2D4Q7Z3S7 1137 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 CRIPAKQ8N1N5 446 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 ANKRD13CQ8N6S4 541 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 PIGOQ8TEQ8 1089 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 JAKMIP2Q96AA8 810 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 ERGIC2Q96RQ1 377 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 NUP58Q9BVL2 599 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 LRRC27Q9C0I9 530 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 GLT8D2Q9H1C3 349 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 PKD2L1Q9P0L9 805 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 SUFUQ9UMX1 484 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 FNDC1Q4ZHG4 1894 aaPredicted RBP7.69□□□□□ -1.18
HERC4-211ENST00000492996 SRCAPQ6ZRS2 3230 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 ABCB11O95342 1321 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 ZBTB39O15060 712 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 MSH4O15457 936 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 FKBP3Q00688 224 aaKnown RBP7.69□□□□□ -1.18
HERC4-211ENST00000492996 LRRC63Q05C16 580 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 EHHADHQ08426 723 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 AP3B2Q13367 1082 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 CCDC91Q7Z6B0 441 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 SRGAP1Q7Z6B7 1085 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 SLFN12Q8IYM2 578 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 ETNPPLQ8TBG4 499 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 LENG9Q96B70 501 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 BHMT2Q9H2M3 363 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 TXNRD2Q9NNW7 524 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 ASB14A6NK59 587 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 LRRC53A6NM62 1247 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 EML1O00423 815 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 AKR1B10O60218 316 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 FGFR1OPO95684 399 aaKnown RBP7.69□□□□□ -1.18
HERC4-211ENST00000492996 PNMA6AP0CW24 399 aaPredicted RBP7.69□□□□□ -1.18
HERC4-211ENST00000492996 CYP2C19P33261 490 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 FLT3LGP49771 235 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 CTTNQ14247 550 aaKnown RBP7.69□□□□□ -1.18
HERC4-211ENST00000492996 TDRD12Q587J7 1177 aaKnown RBP7.69□□□□□ -1.18
HERC4-211ENST00000492996 RSRC2Q7L4I2 434 aaKnown RBP7.69□□□□□ -1.18
HERC4-211ENST00000492996 SCFD1Q8WVM8 642 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 CXorf56Q9H5V9 222 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 PDLIM7Q9NR12 457 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 DNM3Q9UQ16 869 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 SIK3Q9Y2K2 1263 aa7.69□□□□□ -1.18
HERC4-211ENST00000492996 ZNF263O14978 683 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 PRPF6O94906 941 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 ATP1A1P05023 1023 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 SPATA31C1P0DKV0 1188 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 EIF4A3P38919 411 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 KRT83P78385 493 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 SPIRE1Q08AE8 756 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 PSMD2Q13200 908 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 BMS1Q14692 1282 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 PPP2R5AQ15172 486 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 SPA17Q15506 151 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 TRIM71Q2Q1W2 868 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 LRCH2Q5VUJ6 765 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 HAUS3Q68CZ6 603 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 SFR1Q86XK3 245 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 TPH2Q8IWU9 490 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 GPR161Q8N6U8 529 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 RETREG2Q8NC44 543 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 ERMNQ8TAM6 284 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 PSMB7Q99436 277 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 NAP1L4Q99733 375 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 HINFPQ9BQA5 517 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 REEP2Q9BRK0 252 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 MOV10L1Q9BXT6 1211 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 IKZF4Q9H2S9 585 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 HAUS4Q9H6D7 363 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 ARHGAP20Q9P2F6 1191 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 MYO6Q9UM54 1294 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 COL4A3BPQ9Y5P4 624 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 ZHX2Q9Y6X8 837 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 DDX39AO00148 427 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms