RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 PRR16Q569H4 304 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 VPS52Q8N1B4 723 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 NLRP7Q8WX94 980 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 NKD2Q969F2 451 aaPredicted RBP12.43□□□□□ -0.42
SND1-215ENST00000492772 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 SMOC2Q9H3U7 446 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 CHST12Q9NRB3 414 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 STK39Q9UEW8 545 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 VPS13AQ96RL7 3174 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 DMDP11532 3685 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 KLF18A0A0U1RQI7 1052 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 CCDC196A0A1B0GTZ2 297 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 WEE2P0C1S8 567 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 CTSAP10619 480 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 SKIP12755 728 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 SFPQP23246 707 aaKnown RBP eCLIP12.42□□□□□ -0.42
SND1-215ENST00000492772 GNA11P29992 359 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 SFNP31947 248 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 CIITAP33076 1130 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 JAK3P52333 1124 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 EXOSC10Q01780 885 aaKnown RBP12.42□□□□□ -0.42
SND1-215ENST00000492772 DHX32Q7L7V1 743 aaKnown RBP12.42□□□□□ -0.42
SND1-215ENST00000492772 DDX53Q86TM3 631 aaKnown RBP12.42□□□□□ -0.42
SND1-215ENST00000492772 CABP7Q86V35 215 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 PPFIBP1Q86W92 1011 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 ACSF2Q96CM8 615 aaPredicted RBP12.42□□□□□ -0.42
SND1-215ENST00000492772 TRAIPQ9BWF2 469 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 SFXN1Q9H9B4 322 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 CYP26B1Q9NR63 512 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 DISC1Q9NRI5 854 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 LIMD1Q9UGP4 676 aa12.42□□□□□ -0.42
SND1-215ENST00000492772 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 NT5C1B-RDH14C9J2C7 533 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 ZNF862O60290 1169 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 EPCAMP16422 314 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 CDC27P30260 824 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 PHKA2P46019 1235 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 RAB27AP51159 221 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 CWF19L1Q69YN2 538 aaKnown RBP12.41□□□□□ -0.42
SND1-215ENST00000492772 GLB1LQ6UWU2 654 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 CCDC149Q6ZUS6 474 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 OTOP3Q7RTS5 596 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 ERMP1Q7Z2K6 904 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 FRMD5Q7Z6J6 570 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 C12orf76Q8N812 135 aaPredicted RBP12.41□□□□□ -0.42
SND1-215ENST00000492772 BICD2Q8TD16 824 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 SLC22A17Q8WUG5 538 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 AUTS2Q8WXX7 1259 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 LENG9Q96B70 501 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 IGSF21Q96ID5 467 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 ZNF668Q96K58 619 aaPredicted RBP12.41□□□□□ -0.42
SND1-215ENST00000492772 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 RIT2Q99578 217 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 GCOM2Q9BZD3 368 aaPredicted RBP12.41□□□□□ -0.42
SND1-215ENST00000492772 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
SND1-215ENST00000492772 NID2Q14112 1375 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 FAM186AA6NE01 2351 aa12.41□□□□□ -0.42
SND1-215ENST00000492772 C2orf16Q68DN1 1984 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 GAS7O60861 476 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 HMGB1P09429 215 aaKnown RBP12.4□□□□□ -0.42
SND1-215ENST00000492772 AOC1P19801 751 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 FGFR4P22455 802 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 DNM2P50570 870 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 RNASELQ05823 741 aaKnown RBP12.4□□□□□ -0.42
SND1-215ENST00000492772 KRT32Q14532 448 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 PTPN14Q15678 1187 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 UGCGQ16739 394 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 TWF2Q6IBS0 349 aaKnown RBP12.4□□□□□ -0.42
SND1-215ENST00000492772 TMC5Q6UXY8 1006 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 GPR149Q86SP6 731 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 ZNF410Q86VK4 478 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 TMEM173Q86WV6 379 aaPredicted RBP12.4□□□□□ -0.42
SND1-215ENST00000492772 FLCNQ8NFG4 579 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 CCDC148Q8NFR7 591 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 RDM1Q8NG50 284 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 TEKT3Q9BXF9 490 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 EMILIN2Q9BXX0 1053 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 INO80BQ9C086 356 aaPredicted RBP12.4□□□□□ -0.42
SND1-215ENST00000492772 TBC1D13Q9NVG8 400 aa12.4□□□□□ -0.42
SND1-215ENST00000492772 NAP1L2Q9ULW6 460 aaPredicted RBP12.4□□□□□ -0.42
SND1-215ENST00000492772 PIN4Q9Y237 131 aaKnown RBP12.4□□□□□ -0.42
SND1-215ENST00000492772 RIF1Q5UIP0 2472 aaKnown RBP12.4□□□□□ -0.42
SND1-215ENST00000492772 MSH4O15457 936 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 CHMP2AO43633 222 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 FGD1P98174 961 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 TDGQ13569 410 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 TARBP2Q15633 366 aaKnown RBP12.39□□□□□ -0.43
SND1-215ENST00000492772 TSGA10IPQ3SY00 556 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 LRCH2Q5VUJ6 765 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 CCDC105Q8IYK2 499 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 SLC5A5Q92911 643 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 YTHDC1Q96MU7 727 aaKnown RBP12.39□□□□□ -0.43
SND1-215ENST00000492772 RTP3Q9BQQ7 232 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 NRDE2Q9H7Z3 1164 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 SEPT9Q9UHD8 586 aaPredicted RBP12.39□□□□□ -0.43
SND1-215ENST00000492772 DUSP12Q9UNI6 340 aa12.39□□□□□ -0.43
SND1-215ENST00000492772 PTPRZ1P23471 2315 aaPredicted RBP12.39□□□□□ -0.43
SND1-215ENST00000492772 GVINP1Q7Z2Y8 2422 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 ZNF292O60281 2723 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms