RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 ASTN1O14525 1302 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 PKD1L1Q8TDX9 2849 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 ABHD14A-ACY1A0A1B0GW23 586 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 BLACEA4D250 179 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 CDC14CA4D256 554 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 C4orf47A7E2U8 309 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 MINDY4BA8MYZ0 360 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 NBNO60934 754 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 RB1P06400 928 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 PGK2P07205 417 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 WEE2P0C1S8 567 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 TDGF1P13385 188 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 TFE3P19532 575 aaPredicted RBP5.03□□□□□ -1.6
UBR4-215ENST00000492606 ITPKBP27987 946 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 TNFRSF8P28908 595 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 ADRA1BP35368 520 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 SRSF5Q13243 272 aaKnown RBP5.03□□□□□ -1.6
UBR4-215ENST00000492606 UBE4AQ14139 1066 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 RPS26P11Q5JNZ5 115 aaPredicted RBP5.03□□□□□ -1.6
UBR4-215ENST00000492606 RNF43Q68DV7 783 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 ANKRD54Q6NXT1 300 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 AGMOQ6ZNB7 445 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 C1orf229Q6ZS94 237 aaPredicted RBP5.03□□□□□ -1.6
UBR4-215ENST00000492606 MMP21Q8N119 569 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 C12orf50Q8NA57 414 aaPredicted RBP5.03□□□□□ -1.6
UBR4-215ENST00000492606 PJA1Q8NG27 643 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 STK35Q8TDR2 534 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 C11orf84Q9BUA3 381 aaPredicted RBP5.03□□□□□ -1.6
UBR4-215ENST00000492606 GPR108Q9NPR9 543 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 AVENQ9NQS1 362 aaPredicted RBP5.03□□□□□ -1.6
UBR4-215ENST00000492606 PPP4R2Q9NY27 417 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 SLC6A14Q9UN76 642 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 STARD13Q9Y3M8 1113 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 MCM3APO60318 1980 aa5.03□□□□□ -1.6
UBR4-215ENST00000492606 MROH5Q6ZUA9 1318 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 F5H6K3 240 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 DIAPH2O60879 1101 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 FRAT2O75474 233 aaPredicted RBP5.02□□□□□ -1.61
UBR4-215ENST00000492606 PF4P02776 101 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 CXCL10P02778 98 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 ZNF806P0C7X5 589 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 ARAFP10398 606 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 EIF2S2P20042 333 aaKnown RBP5.02□□□□□ -1.61
UBR4-215ENST00000492606 DNAJA1P31689 397 aaKnown RBP5.02□□□□□ -1.61
UBR4-215ENST00000492606 EIF4A3P38919 411 aaKnown RBP5.02□□□□□ -1.61
UBR4-215ENST00000492606 TECP42680 631 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 LIG3P49916 1009 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 PLCD1P51178 756 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 NKX3-2P78367 333 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 KRT76Q01546 638 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 KCNC3Q14003 757 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 SIM2Q14190 667 aaPredicted RBP5.02□□□□□ -1.61
UBR4-215ENST00000492606 SHROOM1Q2M3G4 852 aaPredicted RBP5.02□□□□□ -1.61
UBR4-215ENST00000492606 ZNF792Q3KQV3 632 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 RNFT1Q5M7Z0 435 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 HHIPL2Q6UWX4 724 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 ZNF574Q6ZN55 896 aaPredicted RBP5.02□□□□□ -1.61
UBR4-215ENST00000492606 MYOCDQ8IZQ8 938 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 TDRD5Q8NAT2 981 aaKnown RBP5.02□□□□□ -1.61
UBR4-215ENST00000492606 DEFB124Q8NES8 71 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 TTLL11Q8NHH1 800 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 FEZF2Q8TBJ5 459 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 PLD4Q96BZ4 506 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 GPRASP2Q96D09 838 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 PHACTR3Q96KR7 559 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 TRERF1Q96PN7 1200 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 WDR18Q9BV38 432 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 MRIQ9BWK5 157 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 ARRDC1-AS1Q9H2J1 176 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 TLE6Q9H808 572 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 KCNK12Q9HB15 430 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 USP40Q9NVE5 1235 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 SLC5A4Q9NY91 659 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 PRR12Q9ULL5 1215 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 PLAGL2Q9UPG8 496 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 TRIM33Q9UPN9 1127 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 MTF2Q9Y483 593 aaPredicted RBP5.02□□□□□ -1.61
UBR4-215ENST00000492606 NBEAL2Q6ZNJ1 2754 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 NID2Q14112 1375 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 ZMYM2Q9UBW7 1377 aa5.02□□□□□ -1.61
UBR4-215ENST00000492606 JMJD1CQ15652 2540 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 H3BM21 787 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 CABYRO75952 493 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 B3GALT4O96024 378 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 SUPT20HL2P0C7V6 817 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 VSIG8P0DPA2 414 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 BMP4P12644 408 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 MYF5P13349 255 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 CPB1P15086 417 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 SELPP16109 830 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 HOXB4P17483 251 aaPredicted RBP5.01□□□□□ -1.61
UBR4-215ENST00000492606 CSRP1P21291 193 aaKnown RBP5.01□□□□□ -1.61
UBR4-215ENST00000492606 GBP2P32456 591 aaPredicted RBP5.01□□□□□ -1.61
UBR4-215ENST00000492606 ABCG1P45844 678 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 RGS3P49796 1198 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 ARID5AQ03989 594 aa5.01□□□□□ -1.61
UBR4-215ENST00000492606 TRIM28Q13263 835 aaKnown RBP5.01□□□□□ -1.61
UBR4-215ENST00000492606 CAMK2GQ13555 558 aaPredicted RBP5.01□□□□□ -1.61
UBR4-215ENST00000492606 TAF7Q15545 349 aaPredicted RBP5.01□□□□□ -1.61
UBR4-215ENST00000492606 LCE2CQ5TA81 110 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms