RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 KSR1Q8IVT5 923 aa15.35■□□□□ 0.05
PTPN7-215ENST00000492451 CALML4Q96GE6 196 aa15.35■□□□□ 0.05
PTPN7-215ENST00000492451 ZNF668Q96K58 619 aaPredicted RBP15.35■□□□□ 0.05
PTPN7-215ENST00000492451 USP28Q96RU2 1077 aa15.35■□□□□ 0.05
PTPN7-215ENST00000492451 TSPYL2Q9H2G4 693 aaPredicted RBP15.35■□□□□ 0.05
PTPN7-215ENST00000492451 BHMT2Q9H2M3 363 aa15.35■□□□□ 0.05
PTPN7-215ENST00000492451 TMX1Q9H3N1 280 aa15.35■□□□□ 0.05
PTPN7-215ENST00000492451 C1orf112Q9NSG2 853 aa15.35■□□□□ 0.05
PTPN7-215ENST00000492451 SRPRBQ9Y5M8 271 aaKnown RBP15.35■□□□□ 0.05
PTPN7-215ENST00000492451 STAG3L1P0CL83 205 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 SRGAP2CP0DJJ0 459 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 ZSCAN20P17040 1043 aaPredicted RBP15.34■□□□□ 0.05
PTPN7-215ENST00000492451 ARL2P36404 184 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 PHKA2P46019 1235 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 CEBPZQ03701 1054 aaKnown RBP15.34■□□□□ 0.05
PTPN7-215ENST00000492451 SLC39A14Q15043 492 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 ZRSR1Q15695 479 aaKnown RBP15.34■□□□□ 0.05
PTPN7-215ENST00000492451 ATL3Q6DD88 541 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 SRGAP1Q7Z6B7 1085 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 CABP7Q86V35 215 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 PPM1EQ8WY54 764 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 ADAM2Q99965 735 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 COL25A1Q9BXS0 654 aaPredicted RBP15.34■□□□□ 0.05
PTPN7-215ENST00000492451 CHST12Q9NRB3 414 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 RGS18Q9NS28 235 aa15.34■□□□□ 0.05
PTPN7-215ENST00000492451 TTC3P53804 2025 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 UPP2O95045 317 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 MARCKSP29966 332 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-215ENST00000492451 NASPP49321 788 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-215ENST00000492451 HTRA4P83105 476 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-215ENST00000492451 TAP1Q03518 808 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 STK38Q15208 465 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 PCBP1Q15365 356 aaKnown RBP eCLIP15.33■□□□□ 0.04
PTPN7-215ENST00000492451 FOXD4L5Q5VV16 416 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-215ENST00000492451 FAM117BQ6P1L5 589 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 SLC24A5Q71RS6 500 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 RTN4RL1Q86UN2 441 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-215ENST00000492451 NPAS4Q8IUM7 802 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 RNF149Q8NC42 400 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 LINC01599Q8WXQ3 324 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 FOXD4L4Q8WXT5 416 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-215ENST00000492451 YME1L1Q96TA2 773 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 POLR3FQ9H1D9 316 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-215ENST00000492451 IFT122Q9HBG6 1241 aa15.33■□□□□ 0.04
PTPN7-215ENST00000492451 FBXO2Q9UK22 296 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-215ENST00000492451 E9PMD0 336 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 YEATS4O95619 227 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 IGFBP4P22692 258 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 TXLNAP40222 546 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 SARSP49591 514 aaKnown RBP15.32■□□□□ 0.04
PTPN7-215ENST00000492451 GRB10Q13322 594 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 DSC3Q14574 896 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 CCDC85BQ15834 202 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-215ENST00000492451 FAM102BQ5T8I3 360 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 CATSPER4Q7RTX7 472 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 IFNLR1Q8IU57 520 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-215ENST00000492451 KRI1Q8N9T8 703 aaKnown RBP15.32■□□□□ 0.04
PTPN7-215ENST00000492451 RASSF8Q8NHQ8 419 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 KIFAP3Q92845 792 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 PNMA5Q96PV4 448 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 GAS2L1Q99501 681 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-215ENST00000492451 TIPINQ9BVW5 301 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 NFKBIZQ9BYH8 718 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 CCSER1Q9C0I3 900 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 CSRNP2Q9H175 543 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 DACT1Q9NYF0 836 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 CFAP45Q9UL16 551 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 LRFN2Q9ULH4 789 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 CUL9Q8IWT3 2517 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 VCANP13611 3396 aa15.32■□□□□ 0.04
PTPN7-215ENST00000492451 MGEA5O60502 916 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 GLRA2P23416 452 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 PTENP60484 403 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 GRIN1Q05586 938 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 NCBP1Q09161 790 aaKnown RBP15.31■□□□□ 0.04
PTPN7-215ENST00000492451 PKP1Q13835 747 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 CAPSQ13938 189 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 PPP2R5AQ15172 486 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 TMEM119Q4V9L6 283 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 MAEAQ7L5Y9 396 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 LINC00301Q8NCQ3 95 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 ASAP3Q8TDY4 903 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 KCND2Q9NZV8 630 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 TFIP11Q9UBB9 837 aaKnown RBP15.31■□□□□ 0.04
PTPN7-215ENST00000492451 CCDC39Q9UFE4 941 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 PCDHB7Q9Y5E2 793 aa15.31■□□□□ 0.04
PTPN7-215ENST00000492451 REV3LO60673 3130 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 C9IYK1 514 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 SPTLC2O15270 562 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 PPP6R2O75170 966 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 CSDE1O75534 798 aaKnown RBP15.3■□□□□ 0.04
PTPN7-215ENST00000492451 ERLIN2O94905 339 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 BRD1O95696 1058 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 SKIP12755 728 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 FGFR4P22455 802 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 FAM189BP81408 668 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 COL4A6Q14031 1691 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 KCNK18Q7Z418 384 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 CRIPAKQ8N1N5 446 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 SYT2Q8N9I0 419 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms