RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 PRKCEQ02156 737 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 NECTIN1Q15223 517 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 CWF19L1Q69YN2 538 aaKnown RBP16.34■□□□□ 0.21
SSR4-212ENST00000491833 ERMP1Q7Z2K6 904 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 FLCNQ8NFG4 579 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 NLRP7Q8WX94 980 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 AUTS2Q8WXX7 1259 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 ACSF2Q96CM8 615 aaPredicted RBP16.34■□□□□ 0.21
SSR4-212ENST00000491833 ANO2Q9NQ90 1003 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 CYP26B1Q9NR63 512 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 IRAK3Q9Y616 596 aa16.34■□□□□ 0.21
SSR4-212ENST00000491833 WDR81Q562E7 1941 aa16.33■□□□□ 0.21
SSR4-212ENST00000491833 CTSAP10619 480 aa16.33■□□□□ 0.2
SSR4-212ENST00000491833 FGFR4P22455 802 aa16.33■□□□□ 0.2
SSR4-212ENST00000491833 POLGP54098 1239 aaPredicted RBP16.33■□□□□ 0.2
SSR4-212ENST00000491833 RNF20Q5VTR2 975 aa16.33■□□□□ 0.2
SSR4-212ENST00000491833 CCDC149Q6ZUS6 474 aa16.33■□□□□ 0.2
SSR4-212ENST00000491833 CABP7Q86V35 215 aa16.33■□□□□ 0.2
SSR4-212ENST00000491833 TMEM173Q86WV6 379 aaPredicted RBP16.33■□□□□ 0.2
SSR4-212ENST00000491833 REXO1Q8N1G1 1221 aaKnown RBP16.33■□□□□ 0.2
SSR4-212ENST00000491833 ESYT1Q9BSJ8 1104 aa16.33■□□□□ 0.2
SSR4-212ENST00000491833 SFXN1Q9H9B4 322 aa16.33■□□□□ 0.2
SSR4-212ENST00000491833 NRBP2Q9NSY0 501 aa16.33■□□□□ 0.2
SSR4-212ENST00000491833 MYO10Q9HD67 2058 aa16.33■□□□□ 0.2
SSR4-212ENST00000491833 ESYT2A0FGR8 921 aa16.32■□□□□ 0.2
SSR4-212ENST00000491833 AOC1P19801 751 aa16.32■□□□□ 0.2
SSR4-212ENST00000491833 ID4P47928 161 aa16.32■□□□□ 0.2
SSR4-212ENST00000491833 TBC1D8BQ0IIM8 1120 aa16.32■□□□□ 0.2
SSR4-212ENST00000491833 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
SSR4-212ENST00000491833 PRR16Q569H4 304 aa16.32■□□□□ 0.2
SSR4-212ENST00000491833 TMC5Q6UXY8 1006 aa16.32■□□□□ 0.2
SSR4-212ENST00000491833 DDX53Q86TM3 631 aaKnown RBP16.32■□□□□ 0.2
SSR4-212ENST00000491833 PPFIBP1Q86W92 1011 aa16.32■□□□□ 0.2
SSR4-212ENST00000491833 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
SSR4-212ENST00000491833 C6orf50Q9HD87 102 aa16.32■□□□□ 0.2
SSR4-212ENST00000491833 BRPF3Q9ULD4 1205 aa16.32■□□□□ 0.2
SSR4-212ENST00000491833 KLF18A0A0U1RQI7 1052 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 ZNF862O60290 1169 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 SFPQP23246 707 aaKnown RBP eCLIP16.31■□□□□ 0.2
SSR4-212ENST00000491833 PHKA2P46019 1235 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 RCAN1P53805 252 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 KANK3Q6NY19 840 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 OTOP3Q7RTS5 596 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 CCDC105Q8IYK2 499 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 ADSSL1Q8N142 457 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 SLC22A17Q8WUG5 538 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 IGSF21Q96ID5 467 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 TCEANC2Q96MN5 208 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 GCOM2Q9BZD3 368 aaPredicted RBP16.31■□□□□ 0.2
SSR4-212ENST00000491833 ZMYND12Q9H0C1 365 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 CHST12Q9NRB3 414 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 DUSP12Q9UNI6 340 aa16.31■□□□□ 0.2
SSR4-212ENST00000491833 SKIP12755 728 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 CDC27P30260 824 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 RAB27AP51159 221 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 RNASELQ05823 741 aaKnown RBP16.3■□□□□ 0.2
SSR4-212ENST00000491833 TDGQ13569 410 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 PTPN14Q15678 1187 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 TWF2Q6IBS0 349 aaKnown RBP16.3■□□□□ 0.2
SSR4-212ENST00000491833 GLB1LQ6UWU2 654 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 GPR149Q86SP6 731 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 RTP3Q9BQQ7 232 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 TRAIPQ9BWF2 469 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 TBC1D13Q9NVG8 400 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 STK39Q9UEW8 545 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 FBXL21Q9UKT6 434 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 PIN4Q9Y237 131 aaKnown RBP16.3■□□□□ 0.2
SSR4-212ENST00000491833 INPP5FQ9Y2H2 1132 aa16.3■□□□□ 0.2
SSR4-212ENST00000491833 FAM186AA6NE01 2351 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 CHMP2AO43633 222 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 CSDE1O75534 798 aaKnown RBP16.29■□□□□ 0.2
SSR4-212ENST00000491833 GNA11P29992 359 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 SFNP31947 248 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 CIITAP33076 1130 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 JAK3P52333 1124 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 CDC42EP1Q00587 391 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 ANGPT1Q15389 498 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 UGCGQ16739 394 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 NOMO2Q5JPE7 1267 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 DHX32Q7L7V1 743 aaKnown RBP16.29■□□□□ 0.2
SSR4-212ENST00000491833 BCL7CQ8WUZ0 217 aaPredicted RBP16.29■□□□□ 0.2
SSR4-212ENST00000491833 LPPQ93052 612 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 LENG9Q96B70 501 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 EMILIN2Q9BXX0 1053 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 GBP3Q9H0R5 595 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 NRDE2Q9H7Z3 1164 aa16.29■□□□□ 0.2
SSR4-212ENST00000491833 FAM217BQ9NTX9 383 aaPredicted RBP16.29■□□□□ 0.2
SSR4-212ENST00000491833 SEPT9Q9UHD8 586 aaPredicted RBP16.29■□□□□ 0.2
SSR4-212ENST00000491833 NAP1L2Q9ULW6 460 aaPredicted RBP16.29■□□□□ 0.2
SSR4-212ENST00000491833 PTPRZ1P23471 2315 aaPredicted RBP16.29■□□□□ 0.2
SSR4-212ENST00000491833 C2orf16Q68DN1 1984 aa16.28■□□□□ 0.2
SSR4-212ENST00000491833 GAS7O60861 476 aa16.28■□□□□ 0.2
SSR4-212ENST00000491833 GALTP07902 379 aa16.28■□□□□ 0.2
SSR4-212ENST00000491833 NPR3P17342 541 aa16.28■□□□□ 0.2
SSR4-212ENST00000491833 EXOSC10Q01780 885 aaKnown RBP16.28■□□□□ 0.2
SSR4-212ENST00000491833 LONRF3Q496Y0 759 aa16.28■□□□□ 0.2
SSR4-212ENST00000491833 MTERF2Q49AM1 385 aa16.28■□□□□ 0.2
SSR4-212ENST00000491833 SIX5Q8N196 739 aa16.28■□□□□ 0.2
SSR4-212ENST00000491833 TEKT3Q9BXF9 490 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms