RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 DENND3A2RUS2 1198 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 ASAP2O43150 1006 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 EYA4O95677 639 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 SRGAP2CP0DJJ0 459 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 ARL2P36404 184 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 UBA7P41226 1012 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 NASPP49321 788 aaPredicted RBP25.82■■□□□ 1.72
CPNE9-204ENST00000491802 TAP1Q03518 808 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 GRB10Q13322 594 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 MXD4Q14582 209 aaPredicted RBP25.82■■□□□ 1.72
CPNE9-204ENST00000491802 FOXD4L6Q3SYB3 417 aaPredicted RBP25.82■■□□□ 1.72
CPNE9-204ENST00000491802 FOXD4L3Q6VB84 417 aaPredicted RBP25.82■■□□□ 1.72
CPNE9-204ENST00000491802 RTN4RL1Q86UN2 441 aaPredicted RBP25.82■■□□□ 1.72
CPNE9-204ENST00000491802 PLIN2Q99541 437 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 NT5C3AQ9H0P0 336 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 IFT122Q9HBG6 1241 aa25.82■■□□□ 1.72
CPNE9-204ENST00000491802 CYP11B2P19099 503 aa25.81■■□□□ 1.72
CPNE9-204ENST00000491802 SFPQP23246 707 aaKnown RBP eCLIP25.81■■□□□ 1.72
CPNE9-204ENST00000491802 SLC39A14Q15043 492 aa25.81■■□□□ 1.72
CPNE9-204ENST00000491802 STK38Q15208 465 aa25.81■■□□□ 1.72
CPNE9-204ENST00000491802 TMEM119Q4V9L6 283 aa25.81■■□□□ 1.72
CPNE9-204ENST00000491802 FAM102BQ5T8I3 360 aa25.81■■□□□ 1.72
CPNE9-204ENST00000491802 ADAM2Q99965 735 aa25.81■■□□□ 1.72
CPNE9-204ENST00000491802 INO80BQ9C086 356 aaPredicted RBP25.81■■□□□ 1.72
CPNE9-204ENST00000491802 CSRNP2Q9H175 543 aa25.81■■□□□ 1.72
CPNE9-204ENST00000491802 RC3H2Q9HBD1 1191 aaKnown RBP25.81■■□□□ 1.72
CPNE9-204ENST00000491802 SRPRBQ9Y5M8 271 aaKnown RBP25.81■■□□□ 1.72
CPNE9-204ENST00000491802 MORC2Q9Y6X9 1032 aaPredicted RBP25.81■■□□□ 1.72
CPNE9-204ENST00000491802 RALGAPA2Q2PPJ7 1873 aa25.81■■□□□ 1.72
CPNE9-204ENST00000491802 COL6A3P12111 3177 aa25.81■■□□□ 1.72
CPNE9-204ENST00000491802 TRANK1O15050 2925 aa25.8■■□□□ 1.72
CPNE9-204ENST00000491802 LCHNA4D1U4 455 aa25.8■■□□□ 1.72
CPNE9-204ENST00000491802 SLC26A4O43511 780 aa25.8■■□□□ 1.72
CPNE9-204ENST00000491802 IBSPP21815 317 aaPredicted RBP25.8■■□□□ 1.72
CPNE9-204ENST00000491802 GLRA2P23416 452 aa25.8■■□□□ 1.72
CPNE9-204ENST00000491802 PHKA2P46019 1235 aa25.8■■□□□ 1.72
CPNE9-204ENST00000491802 CAPSQ13938 189 aa25.8■■□□□ 1.72
CPNE9-204ENST00000491802 TFDP1Q14186 410 aa25.8■■□□□ 1.72
CPNE9-204ENST00000491802 RASSF8Q8NHQ8 419 aa25.8■■□□□ 1.72
CPNE9-204ENST00000491802 C1orf112Q9NSG2 853 aa25.8■■□□□ 1.72
CPNE9-204ENST00000491802 TFIP11Q9UBB9 837 aaKnown RBP25.8■■□□□ 1.72
CPNE9-204ENST00000491802 ARHGEF15O94989 841 aa25.79■■□□□ 1.72
CPNE9-204ENST00000491802 DSC3Q14574 896 aa25.79■■□□□ 1.72
CPNE9-204ENST00000491802 CATSPER4Q7RTX7 472 aa25.79■■□□□ 1.72
CPNE9-204ENST00000491802 SRGAP1Q7Z6B7 1085 aa25.79■■□□□ 1.72
CPNE9-204ENST00000491802 LINC00301Q8NCQ3 95 aa25.79■■□□□ 1.72
CPNE9-204ENST00000491802 CALML4Q96GE6 196 aa25.79■■□□□ 1.72
CPNE9-204ENST00000491802 CLIC6Q96NY7 704 aa25.79■■□□□ 1.72
CPNE9-204ENST00000491802 YME1L1Q96TA2 773 aa25.79■■□□□ 1.72
CPNE9-204ENST00000491802 RGS18Q9NS28 235 aa25.79■■□□□ 1.72
CPNE9-204ENST00000491802 RNF216Q9NWF9 866 aaPredicted RBP25.79■■□□□ 1.72
CPNE9-204ENST00000491802 DAXXQ9UER7 740 aaPredicted RBP25.79■■□□□ 1.72
CPNE9-204ENST00000491802 BRD1O95696 1058 aa25.78■■□□□ 1.72
CPNE9-204ENST00000491802 SARSP49591 514 aaKnown RBP25.78■■□□□ 1.72
CPNE9-204ENST00000491802 KARSQ15046 597 aaKnown RBP25.78■■□□□ 1.72
CPNE9-204ENST00000491802 SPECC1Q5M775 1068 aa25.78■■□□□ 1.72
CPNE9-204ENST00000491802 NPAS4Q8IUM7 802 aa25.78■■□□□ 1.72
CPNE9-204ENST00000491802 KCTD17Q8N5Z5 321 aa25.78■■□□□ 1.72
CPNE9-204ENST00000491802 KRI1Q8N9T8 703 aaKnown RBP25.78■■□□□ 1.72
CPNE9-204ENST00000491802 MYLIPQ8WY64 445 aa25.78■■□□□ 1.72
CPNE9-204ENST00000491802 MINDY3Q9H8M7 445 aa25.78■■□□□ 1.72
CPNE9-204ENST00000491802 NLRC5Q86WI3 1866 aa25.78■■□□□ 1.72
CPNE9-204ENST00000491802 LINC01553A4QN01 128 aa25.77■■□□□ 1.72
CPNE9-204ENST00000491802 YEATS4O95619 227 aa25.77■■□□□ 1.72
CPNE9-204ENST00000491802 SSBP05455 408 aaKnown RBP eCLIP25.77■■□□□ 1.72
CPNE9-204ENST00000491802 ZSCAN20P17040 1043 aaPredicted RBP25.77■■□□□ 1.72
CPNE9-204ENST00000491802 PTENP60484 403 aa25.77■■□□□ 1.72
CPNE9-204ENST00000491802 ERVK-21P61565 698 aa25.77■■□□□ 1.72
CPNE9-204ENST00000491802 SLC24A5Q71RS6 500 aa25.77■■□□□ 1.72
CPNE9-204ENST00000491802 ZNF689Q96CS4 500 aaPredicted RBP25.77■■□□□ 1.72
CPNE9-204ENST00000491802 EPSTI1Q96J88 318 aa25.77■■□□□ 1.72
CPNE9-204ENST00000491802 RUSC1Q9BVN2 902 aa25.77■■□□□ 1.72
CPNE9-204ENST00000491802 PIN4Q9Y237 131 aaKnown RBP25.77■■□□□ 1.72
CPNE9-204ENST00000491802 LRRIQ4A6NIV6 560 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 C9IYK1 514 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 SPTLC2O15270 562 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 DGKIO75912 1065 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 STAG3L1P0CL83 205 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 FOSL2P15408 326 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 PLCG1P19174 1290 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 POU3F3P20264 500 aaPredicted RBP25.76■■□□□ 1.71
CPNE9-204ENST00000491802 FAM189BP81408 668 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 USP49Q70CQ1 688 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 BSNDQ8WZ55 320 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 SYMPKQ92797 1274 aaKnown RBP25.76■■□□□ 1.71
CPNE9-204ENST00000491802 TGS1Q96RS0 853 aaKnown RBP25.76■■□□□ 1.71
CPNE9-204ENST00000491802 GAS2L1Q99501 681 aaPredicted RBP25.76■■□□□ 1.71
CPNE9-204ENST00000491802 CCSER1Q9C0I3 900 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 PRDM12Q9H4Q4 367 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 LRFN2Q9ULH4 789 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 ZDHHC9Q9Y397 364 aa25.76■■□□□ 1.71
CPNE9-204ENST00000491802 PLA2G4BP0C869 781 aa25.75■■□□□ 1.71
CPNE9-204ENST00000491802 POU5F1BQ06416 359 aa25.75■■□□□ 1.71
CPNE9-204ENST00000491802 IFNLR1Q8IU57 520 aaPredicted RBP25.75■■□□□ 1.71
CPNE9-204ENST00000491802 LRRC15Q8TF66 581 aa25.75■■□□□ 1.71
CPNE9-204ENST00000491802 SAMD11Q96NU1 681 aa25.75■■□□□ 1.71
CPNE9-204ENST00000491802 ELAC1Q9H777 363 aaKnown RBP25.75■■□□□ 1.71
CPNE9-204ENST00000491802 AGPAT5Q9NUQ2 364 aa25.75■■□□□ 1.71
CPNE9-204ENST00000491802 ADGRA3Q8IWK6 1321 aa25.74■■□□□ 1.71
CPNE9-204ENST00000491802 INO80B-WBP1J3KQ70 363 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms