RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 SPDYE7PQ495Y7 208 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 EFHBQ8N7U6 833 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 CCDC197Q8NCU1 140 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 RNF123Q5XPI4 1314 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 KDM5DQ9BY66 1539 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 NPM3O75607 178 aaKnown RBP14□□□□□ -0.17
COL6A3-212ENST00000491769 DHX9Q08211 1270 aaKnown RBP14□□□□□ -0.17
COL6A3-212ENST00000491769 RASIP1Q5U651 963 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 RCSD1Q6JBY9 416 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 ZFYVE19Q96K21 471 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 CHCHD3Q9NX63 227 aaKnown RBP14□□□□□ -0.17
COL6A3-212ENST00000491769 STX18Q9P2W9 335 aaKnown RBP14□□□□□ -0.17
COL6A3-212ENST00000491769 KIF24Q5T7B8 1368 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 BCAS4Q8TDM0 211 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 LMBRD1Q9NUN5 540 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 SH3BP1Q9Y3L3 701 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 MAP4P27816 1152 aaKnown RBP14□□□□□ -0.17
COL6A3-212ENST00000491769 EEF1DP29692 281 aaKnown RBP14□□□□□ -0.17
COL6A3-212ENST00000491769 DR1Q01658 176 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 PBKQ96KB5 322 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 PARK7Q99497 189 aaKnown RBP14□□□□□ -0.17
COL6A3-212ENST00000491769 SYTL2Q9HCH5 934 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 SAYSD1Q9NPB0 183 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 FBXL5Q9UKA1 691 aa14□□□□□ -0.17
COL6A3-212ENST00000491769 CUL1Q13616 776 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 NHEJ1Q9H9Q4 299 aaPredicted RBP13.99□□□□□ -0.17
COL6A3-212ENST00000491769 CD209Q9NNX6 404 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 SPTLC3Q9NUV7 552 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 PCDHB8Q9UN66 801 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 ERBB3P21860 1342 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 ARIH2O95376 493 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 AKT1P31749 480 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 MFN1Q8IWA4 741 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 CCNYL1Q8N7R7 359 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 TTC17Q96AE7 1141 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 ZNF560Q96MR9 790 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 CPVLQ9H3G5 476 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 CNOT8Q9UFF9 292 aaKnown RBP13.99□□□□□ -0.17
COL6A3-212ENST00000491769 DNAJC12Q9UKB3 198 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 MTMR2Q13614 643 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 PGBD4Q96DM1 585 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 FGFR1OP2Q9NVK5 253 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.99□□□□□ -0.17
COL6A3-212ENST00000491769 CYP21A2P08686 494 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 CAPZA2P47755 286 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 HLFQ16534 295 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 RAPGEF5Q92565 580 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 THEGQ9P2T0 379 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 PLXNC1O60486 1568 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 SSH2Q76I76 1423 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 PSMC1P62191 440 aaKnown RBP13.99□□□□□ -0.17
COL6A3-212ENST00000491769 AIPL1Q9NZN9 384 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 C6orf203Q9P0P8 240 aaPredicted RBP13.99□□□□□ -0.17
COL6A3-212ENST00000491769 NARFQ9UHQ1 456 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 RWDD2AQ9UIY3 292 aa13.99□□□□□ -0.17
COL6A3-212ENST00000491769 DDHD2O94830 711 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 SNAPC2Q13487 334 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 PATL1Q86TB9 770 aaKnown RBP13.98□□□□□ -0.17
COL6A3-212ENST00000491769 SFR1Q86XK3 245 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 OSBP2Q969R2 916 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 KATNAL1Q9BW62 490 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 DHX35Q9H5Z1 703 aaKnown RBP13.98□□□□□ -0.17
COL6A3-212ENST00000491769 CELF2O95319 508 aaKnown RBP13.98□□□□□ -0.17
COL6A3-212ENST00000491769 CALB1P05937 261 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 SFNP31947 248 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 CRLF3Q8IUI8 442 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 MUC3BQ9H195 1237 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 RGL1Q9NZL6 768 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 PCDHB6Q9Y5E3 794 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 PCDHA13Q9Y5I0 950 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 PIK3R2O00459 728 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 ACSL3O95573 720 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 COPS2P61201 443 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 TFDP2Q14188 446 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 ADCK5Q3MIX3 580 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 HEATR6Q6AI08 1181 aaKnown RBP13.98□□□□□ -0.17
COL6A3-212ENST00000491769 HIPK4Q8NE63 616 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 TSSK1BQ9BXA7 367 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 COPEO14579 308 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 HUNKP57058 714 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 XXYLT1Q8NBI6 393 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 BTN2A2Q8WVV5 523 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 C11orf70Q9BRQ4 267 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 EIF2AQ9BY44 585 aaKnown RBP13.98□□□□□ -0.17
COL6A3-212ENST00000491769 THAP9Q9H5L6 903 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 CNOT7Q9UIV1 285 aaKnown RBP13.98□□□□□ -0.17
COL6A3-212ENST00000491769 PCDHGB4Q9UN71 923 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 KIAA0556O60303 1618 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 SETSIPP0DME0 302 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 KITP10721 976 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 PRDX5P30044 214 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 TMEM62Q0P6H9 643 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 CLEC4GQ6UXB4 293 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
COL6A3-212ENST00000491769 PRR23AA6NEV1 266 aa13.97□□□□□ -0.17
COL6A3-212ENST00000491769 POTEMA6NI47 508 aa13.97□□□□□ -0.17
COL6A3-212ENST00000491769 RARBP10826 455 aa13.97□□□□□ -0.17
COL6A3-212ENST00000491769 APBA1Q02410 837 aa13.97□□□□□ -0.17
COL6A3-212ENST00000491769 FLOT2Q14254 428 aa13.97□□□□□ -0.17
COL6A3-212ENST00000491769 TXNRD1Q16881 649 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms