RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 CLEC1BQ9P126 229 aa20.62■□□□□ 0.89
SMIM4-205ENST00000491607 BARX2Q9UMQ3 279 aaPredicted RBP20.62■□□□□ 0.89
SMIM4-205ENST00000491607 HCN4Q9Y3Q4 1203 aa20.62■□□□□ 0.89
SMIM4-205ENST00000491607 A0A0U1RQF3 1178 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 DKC1O60832 514 aaKnown RBP eCLIP20.61■□□□□ 0.89
SMIM4-205ENST00000491607 PBX3P40426 434 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 CLLU1OSQ5K130 101 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 KCNT2Q6UVM3 1135 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 ZNF410Q86VK4 478 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 KSR1Q8IVT5 923 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 HELQQ8TDG4 1101 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 ZNF558Q96NG5 402 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 JPH2Q9BR39 696 aaPredicted RBP20.61■□□□□ 0.89
SMIM4-205ENST00000491607 BRMS1Q9HCU9 246 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 ENTPD7Q9NQZ7 604 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 CYP26B1Q9NR63 512 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 CHST12Q9NRB3 414 aa20.61■□□□□ 0.89
SMIM4-205ENST00000491607 PUF60Q9UHX1 559 aaKnown RBP20.61■□□□□ 0.89
SMIM4-205ENST00000491607 C19orf67A6NJJ6 358 aa20.6■□□□□ 0.89
SMIM4-205ENST00000491607 GLP2RO95838 553 aa20.6■□□□□ 0.89
SMIM4-205ENST00000491607 EOMESO95936 686 aa20.6■□□□□ 0.89
SMIM4-205ENST00000491607 KRT2P35908 639 aa20.6■□□□□ 0.89
SMIM4-205ENST00000491607 PLPP4Q5VZY2 271 aa20.6■□□□□ 0.89
SMIM4-205ENST00000491607 PDE12Q6L8Q7 609 aaKnown RBP20.6■□□□□ 0.89
SMIM4-205ENST00000491607 SLC7A3Q8WY07 619 aa20.6■□□□□ 0.89
SMIM4-205ENST00000491607 MRPS27Q92552 414 aaKnown RBP20.6■□□□□ 0.89
SMIM4-205ENST00000491607 CEP170P1Q96L14 293 aa20.6■□□□□ 0.89
SMIM4-205ENST00000491607 TCF25Q9BQ70 676 aa20.6■□□□□ 0.89
SMIM4-205ENST00000491607 INO80BQ9C086 356 aaPredicted RBP20.6■□□□□ 0.89
SMIM4-205ENST00000491607 PIN4Q9Y237 131 aaKnown RBP20.6■□□□□ 0.89
SMIM4-205ENST00000491607 MYO7AQ13402 2215 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 FAM205CA6NFA0 338 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 TBX3O15119 743 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 DCXO43602 365 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 P4HBP07237 508 aaKnown RBP20.59■□□□□ 0.89
SMIM4-205ENST00000491607 PPM1AP35813 382 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 POLGP54098 1239 aaPredicted RBP20.59■□□□□ 0.89
SMIM4-205ENST00000491607 NPEPPSP55786 919 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 RBM10P98175 930 aaKnown RBP20.59■□□□□ 0.89
SMIM4-205ENST00000491607 PLCB3Q01970 1234 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 KRT17Q04695 432 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 NR5A1Q13285 461 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 ME3Q16798 604 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 EARS2Q5JPH6 523 aaKnown RBP20.59■□□□□ 0.89
SMIM4-205ENST00000491607 TWF2Q6IBS0 349 aaKnown RBP20.59■□□□□ 0.89
SMIM4-205ENST00000491607 NCAPH2Q6IBW4 605 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 HAS1Q92839 578 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 BMP2KQ9NSY1 1161 aaPredicted RBP20.59■□□□□ 0.89
SMIM4-205ENST00000491607 WRAP73Q9P2S5 460 aaPredicted RBP20.59■□□□□ 0.89
SMIM4-205ENST00000491607 LZTS1Q9Y250 596 aa20.59■□□□□ 0.89
SMIM4-205ENST00000491607 FSCN2O14926 492 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 BAG4O95429 457 aaKnown RBP20.58■□□□□ 0.89
SMIM4-205ENST00000491607 LARGE1O95461 756 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 EYA4O95677 639 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 FDPSP14324 419 aaKnown RBP20.58■□□□□ 0.89
SMIM4-205ENST00000491607 ATF7P17544 494 aaPredicted RBP20.58■□□□□ 0.89
SMIM4-205ENST00000491607 PHKA2P46019 1235 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 COASYQ13057 564 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 DUSP6Q16828 381 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 LONRF3Q496Y0 759 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 CATSPER4Q7RTX7 472 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 ZNF598Q86UK7 904 aaKnown RBP20.58■□□□□ 0.89
SMIM4-205ENST00000491607 ZNF579Q8NAF0 562 aaKnown RBP20.58■□□□□ 0.89
SMIM4-205ENST00000491607 SMRP1Q8NCR6 262 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 GTF3C6Q969F1 213 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 CDCA3Q99618 268 aaPredicted RBP20.58■□□□□ 0.89
SMIM4-205ENST00000491607 LXNQ9BS40 222 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 MRPL9Q9BYD2 267 aaKnown RBP20.58■□□□□ 0.89
SMIM4-205ENST00000491607 SPG21Q9NZD8 308 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 COL4A3BPQ9Y5P4 624 aa20.58■□□□□ 0.89
SMIM4-205ENST00000491607 FSD2A1L4K1 749 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 PRR33A8MZF0 331 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 YWHABP31946 246 aaKnown RBP20.57■□□□□ 0.88
SMIM4-205ENST00000491607 FOSBP53539 338 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 CYP4A11Q02928 519 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 EPHA7Q15375 998 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 EXOC8Q8IYI6 725 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 SLFN12Q8IYM2 578 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 LPPQ93052 612 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 FAM122AQ96E09 287 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 DYDC2Q96IM9 177 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 RGL1Q9NZL6 768 aa20.57■□□□□ 0.88
SMIM4-205ENST00000491607 USP15Q9Y4E8 981 aaPredicted RBP20.57■□□□□ 0.88
SMIM4-205ENST00000491607 SRGAP2CP0DJJ0 459 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 SRGAP2BP0DMP2 458 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 SKIP12755 728 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 CA8P35219 290 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 RFC5P40937 340 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 ALDH7A1P49419 539 aaKnown RBP20.56■□□□□ 0.88
SMIM4-205ENST00000491607 NEK4P51957 841 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 LLGL2Q6P1M3 1020 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 OTUD6AQ7L8S5 288 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 TMC7Q7Z402 723 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 VN1R2Q8NFZ6 395 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 PRPF31Q8WWY3 499 aaKnown RBP20.56■□□□□ 0.88
SMIM4-205ENST00000491607 PSPC1Q8WXF1 523 aaKnown RBP20.56■□□□□ 0.88
SMIM4-205ENST00000491607 TMEM143Q96AN5 459 aa20.56■□□□□ 0.88
SMIM4-205ENST00000491607 NGRNQ9NPE2 291 aaKnown RBP20.56■□□□□ 0.88
SMIM4-205ENST00000491607 HIDE1A8MVS5 230 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms