RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 FGFR4P22455 802 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 CTNNB1P35222 781 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 GATMP50440 423 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 LAMTOR4Q0VGL1 99 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 PDIA5Q14554 519 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 PTPROQ16827 1216 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 NAALADL2Q58DX5 795 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 SRGAP1Q7Z6B7 1085 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 FERMT3Q86UX7 667 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 ECHDC2Q86YB7 292 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 P2RX5Q93086 422 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 NLRP4Q96MN2 994 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 MTRQ99707 1265 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 LMAN2LQ9H0V9 348 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 ATP6V0A4Q9HBG4 840 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.96■□□□□ 0.31
COL27A1-206ENST00000490831 RNF19AQ9NV58 838 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 DACT1Q9NYF0 836 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 DBR1Q9UK59 544 aaKnown RBP16.96■□□□□ 0.31
COL27A1-206ENST00000490831 FNDC1Q4ZHG4 1894 aaPredicted RBP16.96■□□□□ 0.31
COL27A1-206ENST00000490831 SPTBN5Q9NRC6 3674 aaKnown RBP16.96■□□□□ 0.31
COL27A1-206ENST00000490831 HOXA2O43364 376 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 EOMESO95936 686 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 PRPHP41219 470 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 POU5F1BQ06416 359 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 PTGDRQ13258 359 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 MXD4Q14582 209 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-206ENST00000490831 RILPL1Q5EBL4 403 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 FAM102BQ5T8I3 360 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 ZNF598Q86UK7 904 aaKnown RBP16.95■□□□□ 0.3
COL27A1-206ENST00000490831 IFNLR1Q8IU57 520 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-206ENST00000490831 IGSF22Q8N9C0 903 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 ERMNQ8TAM6 284 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 PIGOQ8TEQ8 1089 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 NACC1Q96RE7 527 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 XIRP2A4UGR9 3374 aa16.95■□□□□ 0.3
COL27A1-206ENST00000490831 ATF7P17544 494 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-206ENST00000490831 ARL2P36404 184 aa16.94■□□□□ 0.3
COL27A1-206ENST00000490831 PCBP1Q15365 356 aaKnown RBP eCLIP16.94■□□□□ 0.3
COL27A1-206ENST00000490831 PAN2Q504Q3 1202 aaKnown RBP16.94■□□□□ 0.3
COL27A1-206ENST00000490831 HAUS3Q68CZ6 603 aa16.94■□□□□ 0.3
COL27A1-206ENST00000490831 MCTP1Q6DN14 999 aa16.94■□□□□ 0.3
COL27A1-206ENST00000490831 TMEM117Q9H0C3 514 aa16.94■□□□□ 0.3
COL27A1-206ENST00000490831 BMP2KQ9NSY1 1161 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-206ENST00000490831 COG5Q9UP83 839 aa16.94■□□□□ 0.3
COL27A1-206ENST00000490831 STK24Q9Y6E0 443 aa16.94■□□□□ 0.3
COL27A1-206ENST00000490831 KIAA1671Q9BY89 1806 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 TBKBP1A7MCY6 615 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 H3BQV1 296 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 FGFR1P11362 822 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 PHKA2P46019 1235 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 PTENP60484 403 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 MRPS5P82675 430 aaKnown RBP16.93■□□□□ 0.3
COL27A1-206ENST00000490831 TIGD5Q53EQ6 642 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 TJAP1Q5JTD0 557 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 LARP1BQ659C4 914 aaKnown RBP16.93■□□□□ 0.3
COL27A1-206ENST00000490831 CATSPER4Q7RTX7 472 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 RNF149Q8NC42 400 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 RSPH1Q8WYR4 309 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 CASD1Q96PB1 797 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 ASB2Q96Q27 587 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 NFKBIZQ9BYH8 718 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 MINDY3Q9H8M7 445 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 AGPAT5Q9NUQ2 364 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 PLAGL2Q9UPG8 496 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 CUL9Q8IWT3 2517 aa16.93■□□□□ 0.3
COL27A1-206ENST00000490831 BRWD1Q9NSI6 2320 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 A0A087WWV3 80 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 GRM6O15303 877 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 ZNF623O75123 536 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 SRGAP2CP0DJJ0 459 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 SKIP12755 728 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 HOXA11P31270 313 aaPredicted RBP16.92■□□□□ 0.3
COL27A1-206ENST00000490831 ATP2C1P98194 919 aaPredicted RBP16.92■□□□□ 0.3
COL27A1-206ENST00000490831 COL19A1Q14993 1142 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 IL17AQ16552 155 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 POTEGQ6S5H5 508 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 CCDC43Q96MW1 224 aaKnown RBP16.92■□□□□ 0.3
COL27A1-206ENST00000490831 COL25A1Q9BXS0 654 aaPredicted RBP16.92■□□□□ 0.3
COL27A1-206ENST00000490831 RAB34Q9BZG1 259 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 CWH43Q9H720 699 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 LRWD1Q9UFC0 647 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 PIN4Q9Y237 131 aaKnown RBP16.92■□□□□ 0.3
COL27A1-206ENST00000490831 GTF3C3Q9Y5Q9 886 aa16.92■□□□□ 0.3
COL27A1-206ENST00000490831 MYO7AQ13402 2215 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 DLL1O00548 723 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 ITGB1P05556 798 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 GLRA2P23416 452 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 RAB27AP51159 221 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 CAPSQ13938 189 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 CAMK1Q14012 370 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 TFDP1Q14186 410 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 SKIV2LQ15477 1246 aaKnown RBP16.91■□□□□ 0.3
COL27A1-206ENST00000490831 ECM1Q16610 540 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 CLLU1OSQ5K130 101 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 MCPH1Q8NEM0 835 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 ASAP3Q8TDY4 903 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 HLA-CQ95604 372 aa16.91■□□□□ 0.3
COL27A1-206ENST00000490831 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
COL27A1-206ENST00000490831 TYW1Q9NV66 732 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms