RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 RIC1Q4ADV7 1423 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 KRIT1O00522 736 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 TCP1P17987 556 aaKnown RBP15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 ETF1P62495 437 aaKnown RBP15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 PCSK9Q8NBP7 692 aaKnown RBP15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 DAGLBQ8NCG7 672 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 HYOU1Q9Y4L1 999 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 DCDC2CA8MYV0 355 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 H7C0C1 242 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 ZNF18P17022 549 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 ADORA2AP29274 412 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 ATP5OP48047 213 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 ERVK-9P63128 1117 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 ERVK-24P63145 666 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 KCNB1Q14721 858 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 GLB1LQ6UWU2 654 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 CEP128Q6ZU80 1094 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 CATSPER3Q86XQ3 398 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 PPANQ9NQ55 473 aaKnown RBP15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 YDJCA8MPS7 323 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 PDXKO00764 312 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 CALN1Q9BXU9 219 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 ABHD16BQ9H3Z7 469 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 KNDC1Q76NI1 1749 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 IFT172Q9UG01 1749 aa15.5■□□□□ 0.07
ARHGEF39-205ENST00000490638 CNTN2Q02246 1040 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 WDR72Q3MJ13 1102 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 IFT20Q8IY31 132 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 PGBD4Q96DM1 585 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 CLMNQ96JQ2 1002 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 PXMP2Q9NR77 195 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 KCND2Q9NZV8 630 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 SEPT10Q9P0V9 454 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 CHD2O14647 1828 aaKnown RBP15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 PLS3P13797 630 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 CPB1P15086 417 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 FXR2P51116 673 aaKnown RBP eCLIP15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 KCNK9Q9NPC2 374 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 COL14A1Q05707 1796 aaKnown RBP15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 LGALS16A8MUM7 142 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 A8MXQ7 604 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 TRAPPC3O43617 180 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 CYP11B2P19099 503 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 THPOP40225 353 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 TAB3Q8N5C8 712 aaPredicted RBP15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 TARS2Q9BW92 718 aaKnown RBP15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 PRMT7Q9NVM4 692 aaPredicted RBP15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 EMSYQ7Z589 1322 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 XRN1Q8IZH2 1706 aaKnown RBP15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 ARL4AP40617 200 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 STK4Q13043 487 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 SEMA3FQ13275 785 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 METTL16Q86W50 562 aaKnown RBP15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 BBS5Q8N3I7 341 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 FBXL13Q8NEE6 735 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 DNERQ8NFT8 737 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 ZNF560Q96MR9 790 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 ADAM22Q9P0K1 906 aa15.49■□□□□ 0.07
ARHGEF39-205ENST00000490638 H3BRB1 525 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 DYNC1I1O14576 645 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 SERPING1P05155 500 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 NTRK3Q16288 839 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 KYAT1Q16773 422 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 CDR2LQ86X02 465 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 VSTM4Q8IW00 320 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 TUT1Q9H6E5 874 aaKnown RBP15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 PIDD1Q9HB75 910 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 A1CFQ9NQ94 594 aaKnown RBP15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 SPTLC3Q9NUV7 552 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 ZNF541Q9H0D2 1346 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 CCDC66A2RUB6 948 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 SELENOSQ9BQE4 189 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 UNC45AQ9H3U1 944 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 AGAP1Q9UPQ3 857 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 ATRNO75882 1429 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 OAZ1P54368 228 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 CCNYQ8ND76 341 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 GSDMBQ8TAX9 411 aa15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF39-205ENST00000490638 TGFB3P10600 412 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 CLCN3P51790 818 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 FKBP1BP68106 108 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 SARNPP82979 210 aaKnown RBP15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 MOXD1Q6UVY6 613 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 STARD7Q9NQZ5 370 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 TUBE1Q9UJT0 475 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 NALCNQ8IZF0 1738 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 C17orf102A2RUQ5 167 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 TBXAS1P24557 533 aaPredicted RBP15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 ZC2HC1CQ53FD0 456 aaPredicted RBP15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 ERO1AQ96HE7 468 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 RNF208Q9H0X6 261 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 KIAA0391O15091 583 aaKnown RBP15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 GRIN1Q05586 938 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 PPP2R5EQ16537 467 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 CDO1Q16878 200 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 PASD1Q8IV76 773 aa15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.47■□□□□ 0.07
ARHGEF39-205ENST00000490638 KLRG1Q96E93 195 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms