RNA–Protein interactions for RNA: ENST00000490500.5

RBBP4-213, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-213	ENST00000490500	AIFM3	Q96NN9	605 aa		13.95	□□□□□ -0.18
RBBP4-213	ENST00000490500	SH2D3A	Q9BRG2	576 aa		13.95	□□□□□ -0.18
RBBP4-213	ENST00000490500	TRAIP	Q9BWF2	469 aa		13.95	□□□□□ -0.18
RBBP4-213	ENST00000490500	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.95	□□□□□ -0.18
RBBP4-213	ENST00000490500	TM6SF1	Q9BZW5	370 aa		13.95	□□□□□ -0.18
RBBP4-213	ENST00000490500	CHST12	Q9NRB3	414 aa		13.95	□□□□□ -0.18
RBBP4-213	ENST00000490500	DACT1	Q9NYF0	836 aa		13.95	□□□□□ -0.18
RBBP4-213	ENST00000490500	SPG21	Q9NZD8	308 aa		13.95	□□□□□ -0.18
RBBP4-213	ENST00000490500	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.95	□□□□□ -0.18
RBBP4-213	ENST00000490500	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.95	□□□□□ -0.18
RBBP4-213	ENST00000490500	CACNA1H	O95180	2353 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500		A0A087WZ62	844 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	CPLX1	O14810	134 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	TEC	P42680	631 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	ZXDA	P98168	799 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	NHLH1	Q02575	133 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	KRT17	Q04695	432 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	ANO5	Q75V66	913 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	ALYREF	Q86V81	257 aa	Known RBP	13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	MRPL43	Q8N983	215 aa	Known RBP	13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	HELQ	Q8TDG4	1101 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	RPGRIP1	Q96KN7	1286 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	ENTPD7	Q9NQZ7	604 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	CYP46A1	Q9Y6A2	500 aa		13.94	□□□□□ -0.18
RBBP4-213	ENST00000490500	TMEM221	A6NGB7	291 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	C2orf71	A6NGG8	1288 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	DDX11L8	A8MPP1	907 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500		M0R296	226 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	EML1	O00423	815 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	SLC37A4	O43826	429 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	MAF	O75444	373 aa	Predicted RBP	13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	HOXB8	P17481	243 aa	Predicted RBP	13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	PHKA2	P46019	1235 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	PSMC5	P62195	406 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	NONO	Q15233	471 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	INF2	Q27J81	1249 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	TMC7	Q7Z402	723 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	ZNF410	Q86VK4	478 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	DDX25	Q9UHL0	483 aa	Known RBP	13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	PLXNA4	Q9HCM2	1894 aa		13.93	□□□□□ -0.18
RBBP4-213	ENST00000490500	NT5C1B-RDH14	C9J2C7	533 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	SRGAP2B	P0DMP2	458 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	SFPQ	P23246	707 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	DNM2	P50570	870 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	BCAR1	P56945	870 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	STK3	Q13188	491 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	LLGL2	Q6P1M3	1020 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	KRT25	Q7Z3Z0	450 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	APOL5	Q9BWW9	433 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	MRPL9	Q9BYD2	267 aa	Known RBP	13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	INO80B	Q9C086	356 aa	Predicted RBP	13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	KCNMB3	Q9NPA1	279 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	VAV3	Q9UKW4	847 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	KCNJ14	Q9UNX9	436 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	HCFC2	Q9Y5Z7	792 aa		13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	MYH9	P35579	1960 aa	Known RBP	13.92	□□□□□ -0.18
RBBP4-213	ENST00000490500	CLASP2	O75122	1294 aa	Known RBP	13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	ZNF623	O75123	536 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	ALDH7A1	P49419	539 aa	Known RBP	13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	PPP2R5C	Q13362	524 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	SMC1A	Q14683	1233 aa	Known RBP	13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	LETM2	Q2VYF4	491 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	PLA2G4F	Q68DD2	849 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	CPLX2	Q6PUV4	134 aa	Known RBP	13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	TMEM173	Q86WV6	379 aa	Predicted RBP	13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	RHPN2	Q8IUC4	686 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	KSR1	Q8IVT5	923 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	RSPH1	Q8WYR4	309 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	CASP10	Q92851	521 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	LPP	Q93052	612 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	PBXIP1	Q96AQ6	731 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	ASIC4	Q96FT7	647 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	FAM20A	Q96MK3	541 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	PHF20	Q9BVI0	1012 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	IFT122	Q9HBG6	1241 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	CYP26B1	Q9NR63	512 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	PDRG1	Q9NUG6	133 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	CDH22	Q9UJ99	828 aa		13.91	□□□□□ -0.18
RBBP4-213	ENST00000490500	MEIS3P2	A8K0S8	358 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	OFD1	O75665	1012 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	SKI	P12755	728 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	QARS	P47897	775 aa	Known RBP	13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	MRE11	P49959	708 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	NPEPPS	P55786	919 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	SIGLEC14	Q08ET2	396 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	SCRN1	Q12765	414 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	IER5L	Q5T953	404 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	TWF2	Q6IBS0	349 aa	Known RBP	13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	PPP4R3A	Q6IN85	833 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	ZNF579	Q8NAF0	562 aa	Known RBP	13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	HAS1	Q92839	578 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	JPH2	Q9BR39	696 aa	Predicted RBP	13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	ZBP1	Q9H171	429 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	ADAM7	Q9H2U9	754 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	NRDE2	Q9H7Z3	1164 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	FAM105A	Q9NUU6	356 aa		13.9	□□□□□ -0.18
RBBP4-213	ENST00000490500	PIN4	Q9Y237	131 aa	Known RBP	13.9	□□□□□ -0.18

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