RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 KBTBD4Q9NVX7 518 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 USP25Q9UHP3 1055 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 KCNG1Q9UIX4 513 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 KCNH3Q9ULD8 1083 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 A0A087WZ62 844 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 ABHD14A-ACY1A0A1B0GW23 586 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 ACTN1P12814 892 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 NAMPTP43490 491 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 ZNF131P52739 623 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 CAPSQ13938 189 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 CDCA2Q69YH5 1023 aaPredicted RBP19.33■□□□□ 0.68
ERCC3-207ENST00000490062 DEFB128Q7Z7B8 93 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 NLRP7Q8WX94 980 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 FDXACB1Q9BRP7 624 aaPredicted RBP19.33■□□□□ 0.68
ERCC3-207ENST00000490062 NTPCRQ9BSD7 190 aaKnown RBP19.33■□□□□ 0.68
ERCC3-207ENST00000490062 FTHL17Q9BXU8 183 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 TNMDQ9H2S6 317 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 GPRC5CQ9NQ84 441 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 BMP2KQ9NSY1 1161 aaPredicted RBP19.33■□□□□ 0.68
ERCC3-207ENST00000490062 PCDH10Q9P2E7 1040 aa19.33■□□□□ 0.68
ERCC3-207ENST00000490062 NOC2LQ9Y3T9 749 aaKnown RBP19.33■□□□□ 0.68
ERCC3-207ENST00000490062 GPR182O15218 404 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 RPS6KA5O75582 802 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 PFKFB1P16118 471 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 FAM102BQ5T8I3 360 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 CHRDL2Q6WN34 429 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 SV2BQ7L1I2 683 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 FAM228AQ86W67 206 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 GPBP1Q86WP2 473 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 KSR1Q8IVT5 923 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 TDHQ8IZJ6 230 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 RNF149Q8NC42 400 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 MRPS27Q92552 414 aaKnown RBP19.32■□□□□ 0.68
ERCC3-207ENST00000490062 MTIF3Q9H2K0 278 aaKnown RBP19.32■□□□□ 0.68
ERCC3-207ENST00000490062 PADI3Q9ULW8 664 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 MICAL3Q7RTP6 2002 aa19.32■□□□□ 0.68
ERCC3-207ENST00000490062 POLR2DO15514 142 aaKnown RBP19.31■□□□□ 0.68
ERCC3-207ENST00000490062 HIP1RO75146 1068 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 ACRP10323 421 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 SCP2P22307 547 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 PHKA2P46019 1235 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 GIT2Q14161 759 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 IKBKEQ14164 716 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 TCTN1Q2MV58 587 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 PDILTQ8N807 584 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 SPIRE2Q8WWL2 714 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 BSNDQ8WZ55 320 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 NLRP4Q96MN2 994 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 LRRC27Q9C0I9 530 aa19.31■□□□□ 0.68
ERCC3-207ENST00000490062 PHLPP2Q6ZVD8 1323 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 SSBP05455 408 aaKnown RBP eCLIP19.3■□□□□ 0.68
ERCC3-207ENST00000490062 SLFN14P0C7P3 912 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 SFPQP23246 707 aaKnown RBP eCLIP19.3■□□□□ 0.68
ERCC3-207ENST00000490062 CD52P31358 61 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 PAK2Q13177 524 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 SHHQ15465 462 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 FAM187BQ17R55 369 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 C9orf50Q5SZB4 431 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 PPP4R3CPQ6ZMV5 832 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 DNAJC19Q96DA6 116 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 IFT74Q96LB3 600 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 REEP2Q9BRK0 252 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 PANK2Q9BZ23 570 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 C2orf40Q9H1Z8 148 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 ST3GAL5Q9UNP4 418 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 GINS2Q9Y248 185 aa19.3■□□□□ 0.68
ERCC3-207ENST00000490062 A0A1B0GVL5 298 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 FRMD3A2A2Y4 597 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 MYMKA6NI61 221 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 ACTN4O43707 911 aaKnown RBP19.29■□□□□ 0.68
ERCC3-207ENST00000490062 SRGAP2CP0DJJ0 459 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 PLS3P13797 630 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 AMPD3Q01432 767 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 DSC3Q14574 896 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 MAEAQ7L5Y9 396 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 PHOSPHO2Q8TCD6 241 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 DDX12PQ92771 950 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 DHX58Q96C10 678 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 SCLT1Q96NL6 688 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 PPP1R16BQ96T49 567 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 TRAIPQ9BWF2 469 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 TSPYL2Q9H2G4 693 aaPredicted RBP19.29■□□□□ 0.68
ERCC3-207ENST00000490062 TMX1Q9H3N1 280 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 MINDY3Q9H8M7 445 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 CHST12Q9NRB3 414 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 LARSQ9P2J5 1176 aaKnown RBP19.29■□□□□ 0.68
ERCC3-207ENST00000490062 ARHGAP28Q9P2N2 729 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 MYH11P35749 1972 aa19.29■□□□□ 0.68
ERCC3-207ENST00000490062 RANBP2P49792 3224 aaKnown RBP19.29■□□□□ 0.68
ERCC3-207ENST00000490062 MYL1P05976 194 aa19.28■□□□□ 0.68
ERCC3-207ENST00000490062 SYKP43405 635 aa19.28■□□□□ 0.68
ERCC3-207ENST00000490062 NPTX2P47972 431 aa19.28■□□□□ 0.68
ERCC3-207ENST00000490062 NDUFA8P51970 172 aa19.28■□□□□ 0.68
ERCC3-207ENST00000490062 EFNA5P52803 228 aa19.28■□□□□ 0.68
ERCC3-207ENST00000490062 MBTD1Q05BQ5 628 aa19.28■□□□□ 0.68
ERCC3-207ENST00000490062 DMP1Q13316 513 aaPredicted RBP19.28■□□□□ 0.68
ERCC3-207ENST00000490062 AMHR2Q16671 573 aa19.28■□□□□ 0.68
ERCC3-207ENST00000490062 FSIP1Q8NA03 581 aa19.28■□□□□ 0.68
ERCC3-207ENST00000490062 PRIMPOLQ96LW4 560 aa19.28■□□□□ 0.68
ERCC3-207ENST00000490062 TRIM9Q9C026 710 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms