RNA–Protein interactions for RNA: ENST00000489888.1

MED23-208, Transcript of mediator complex subunit 23, human

TSL 3

Gene MED23, Length 745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED23-208	ENST00000489888	C1orf112	Q9NSG2	853 aa		13.64	□□□□□ -0.23
MED23-208	ENST00000489888		A0A087WZ62	844 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	LCHN	A4D1U4	455 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	LINC01553	A4QN01	128 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	STX6	O43752	255 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	LINC00271	P0C7V0	271 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	SARS	P49591	514 aa	Known RBP	13.63	□□□□□ -0.23
MED23-208	ENST00000489888	POLG	P54098	1239 aa	Predicted RBP	13.63	□□□□□ -0.23
MED23-208	ENST00000489888	EMC2	Q15006	297 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	PPP2R2D	Q66LE6	453 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	SLC24A5	Q71RS6	500 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	SRGAP1	Q7Z6B7	1085 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	FERMT3	Q86UX7	667 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	NPAS4	Q8IUM7	802 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	PIGO	Q8TEQ8	1089 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	PRPF31	Q8WWY3	499 aa	Known RBP	13.63	□□□□□ -0.23
MED23-208	ENST00000489888	PSPC1	Q8WXF1	523 aa	Known RBP	13.63	□□□□□ -0.23
MED23-208	ENST00000489888	MTR	Q99707	1265 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.63	□□□□□ -0.23
MED23-208	ENST00000489888	ZBED2	Q9BTP6	218 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	NFKBIZ	Q9BYH8	718 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.63	□□□□□ -0.23
MED23-208	ENST00000489888	CHST12	Q9NRB3	414 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	GINS2	Q9Y248	185 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	COL4A3BP	Q9Y5P4	624 aa		13.63	□□□□□ -0.23
MED23-208	ENST00000489888	COL6A3	P12111	3177 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	DGKI	O75912	1065 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	CYP11B2	P19099	503 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	LAMTOR4	Q0VGL1	99 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	NFX1	Q12986	1120 aa	Known RBP	13.62	□□□□□ -0.23
MED23-208	ENST00000489888	MXD4	Q14582	209 aa	Predicted RBP	13.62	□□□□□ -0.23
MED23-208	ENST00000489888	PTPA	Q15257	358 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
MED23-208	ENST00000489888	RHPN2	Q8IUC4	686 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	HSCB	Q8IWL3	235 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	TMEM143	Q96AN5	459 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	AK8	Q96MA6	479 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	FAM161B	Q96MY7	647 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	ADAM2	Q99965	735 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	ATP6V0A4	Q9HBG4	840 aa		13.62	□□□□□ -0.23
MED23-208	ENST00000489888	STAG3L1	P0CL83	205 aa		13.61	□□□□□ -0.23
MED23-208	ENST00000489888	CCT6A	P40227	531 aa	Known RBP	13.61	□□□□□ -0.23
MED23-208	ENST00000489888	PTEN	P60484	403 aa		13.61	□□□□□ -0.23
MED23-208	ENST00000489888	SF3A1	Q15459	793 aa	Known RBP	13.61	□□□□□ -0.23
MED23-208	ENST00000489888	KRT79	Q5XKE5	535 aa		13.61	□□□□□ -0.23
MED23-208	ENST00000489888	POTEG	Q6S5H5	508 aa		13.61	□□□□□ -0.23
MED23-208	ENST00000489888	KSR1	Q8IVT5	923 aa		13.61	□□□□□ -0.23
MED23-208	ENST00000489888	NLRP7	Q8WX94	980 aa		13.61	□□□□□ -0.23
MED23-208	ENST00000489888	CLP1	Q92989	425 aa	Known RBP	13.61	□□□□□ -0.23
MED23-208	ENST00000489888	SAMD11	Q96NU1	681 aa		13.61	□□□□□ -0.23
MED23-208	ENST00000489888	TGS1	Q96RS0	853 aa	Known RBP	13.61	□□□□□ -0.23
MED23-208	ENST00000489888	PPP1R16B	Q96T49	567 aa		13.61	□□□□□ -0.23
MED23-208	ENST00000489888		A0A087WWV3	80 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888		A0A0U1RQF3	1178 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	VPS37C	A5D8V6	355 aa	Predicted RBP	13.6	□□□□□ -0.23
MED23-208	ENST00000489888	LPXN	O60711	386 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	ZNF623	O75123	536 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	EYA4	O95677	639 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	GLRA2	P23416	452 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	ADGRE1	Q14246	886 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	ZNF598	Q86UK7	904 aa	Known RBP	13.6	□□□□□ -0.23
MED23-208	ENST00000489888	CMTR2	Q8IYT2	770 aa	Known RBP	13.6	□□□□□ -0.23
MED23-208	ENST00000489888	MCPH1	Q8NEM0	835 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	ASAP3	Q8TDY4	903 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	SNX29	Q8TEQ0	813 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	MYLIP	Q8WY64	445 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	ZNF668	Q96K58	619 aa	Predicted RBP	13.6	□□□□□ -0.23
MED23-208	ENST00000489888	PRDM12	Q9H4Q4	367 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	TMEM161A	Q9NX61	479 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	LMCD1	Q9NZU5	365 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	KIAA1024	Q9UPX6	916 aa		13.6	□□□□□ -0.23
MED23-208	ENST00000489888	EPOP	A6NHQ4	379 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	PP2D1	A8MPX8	630 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	C5orf67	F2Z3F1	127 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	CSDE1	O75534	798 aa	Known RBP	13.59	□□□□□ -0.23
MED23-208	ENST00000489888	UPP2	O95045	317 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	EOMES	O95936	686 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	ZSCAN20	P17040	1043 aa	Predicted RBP	13.59	□□□□□ -0.23
MED23-208	ENST00000489888	SFPQ	P23246	707 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
MED23-208	ENST00000489888	CDC25A	P30304	524 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	HOXA11	P31270	313 aa	Predicted RBP	13.59	□□□□□ -0.23
MED23-208	ENST00000489888	LONP1	P36776	959 aa	Known RBP	13.59	□□□□□ -0.23
MED23-208	ENST00000489888	GRB10	Q13322	594 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	FAM117B	Q6P1L5	589 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	PADI6	Q6TGC4	694 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	SPRED2	Q7Z698	418 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	RNF149	Q8NC42	400 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	PNMA5	Q96PV4	448 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	YME1L1	Q96TA2	773 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	MINDY3	Q9H8M7	445 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	DDX19A	Q9NUU7	478 aa	Known RBP	13.59	□□□□□ -0.23
MED23-208	ENST00000489888	RNF19A	Q9NV58	838 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	DACT1	Q9NYF0	836 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	DAXX	Q9UER7	740 aa	Predicted RBP	13.59	□□□□□ -0.23
MED23-208	ENST00000489888	DNM3	Q9UQ16	869 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	CLIC4	Q9Y696	253 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	ARID2	Q68CP9	1835 aa		13.59	□□□□□ -0.23
MED23-208	ENST00000489888	DENND3	A2RUS2	1198 aa		13.58	□□□□□ -0.24
MED23-208	ENST00000489888	VWA3A	A6NCI4	1184 aa		13.58	□□□□□ -0.24
MED23-208	ENST00000489888	RB1	P06400	928 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms