RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 ERVFC1P60507 584 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 KRT17Q04695 432 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 KCNT2Q6UVM3 1135 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 ANO5Q75V66 913 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 EXOC8Q8IYI6 725 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 RNF169Q8NCN4 708 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 SMRP1Q8NCR6 262 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 RSPH1Q8WYR4 309 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 ZNF558Q96NG5 402 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 TRAIPQ9BWF2 469 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 PPP4R2Q9NY27 417 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 VAV3Q9UKW4 847 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 PCDHGC5Q9Y5F6 944 aa22.54■■□□□ 1.2
CACFD1-205ENST00000489519 A0A087WZ62 844 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 EML1O00423 815 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 MARCH6O60337 910 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 CCNT1O60563 726 aaKnown RBP22.53■■□□□ 1.2
CACFD1-205ENST00000489519 CSDE1O75534 798 aaKnown RBP22.53■■□□□ 1.2
CACFD1-205ENST00000489519 SKIP12755 728 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 FGFR4P22455 802 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 PLA2G5P39877 138 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 ZNF598Q86UK7 904 aaKnown RBP22.53■■□□□ 1.2
CACFD1-205ENST00000489519 FAM122AQ96E09 287 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 SH2D3AQ9BRG2 576 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 FDXACB1Q9BRP7 624 aaPredicted RBP22.53■■□□□ 1.2
CACFD1-205ENST00000489519 NGRNQ9NPE2 291 aaKnown RBP22.53■■□□□ 1.2
CACFD1-205ENST00000489519 CYP26B1Q9NR63 512 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 SPG21Q9NZD8 308 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 ORC3Q9UBD5 711 aaPredicted RBP22.53■■□□□ 1.2
CACFD1-205ENST00000489519 PPME1Q9Y570 386 aa22.53■■□□□ 1.2
CACFD1-205ENST00000489519 FSCN2O14926 492 aa22.52■■□□□ 1.2
CACFD1-205ENST00000489519 PER2O15055 1255 aa22.52■■□□□ 1.2
CACFD1-205ENST00000489519 EIF5BO60841 1220 aaKnown RBP22.52■■□□□ 1.2
CACFD1-205ENST00000489519 GLP2RO95838 553 aa22.52■■□□□ 1.2
CACFD1-205ENST00000489519 P4HBP07237 508 aaKnown RBP22.52■■□□□ 1.2
CACFD1-205ENST00000489519 DUSP6Q16828 381 aa22.52■■□□□ 1.2
CACFD1-205ENST00000489519 CLLU1OSQ5K130 101 aa22.52■■□□□ 1.2
CACFD1-205ENST00000489519 PIK3AP1Q6ZUJ8 805 aa22.52■■□□□ 1.2
CACFD1-205ENST00000489519 RHPN2Q8IUC4 686 aa22.52■■□□□ 1.2
CACFD1-205ENST00000489519 SLC7A3Q8WY07 619 aa22.52■■□□□ 1.2
CACFD1-205ENST00000489519 MRPL9Q9BYD2 267 aaKnown RBP22.52■■□□□ 1.2
CACFD1-205ENST00000489519 CTDNEP1O95476 244 aa22.51■■□□□ 1.19
CACFD1-205ENST00000489519 SRGAP2BP0DMP2 458 aa22.51■■□□□ 1.19
CACFD1-205ENST00000489519 AK2P54819 239 aa22.51■■□□□ 1.19
CACFD1-205ENST00000489519 ERICH6BQ5W0A0 696 aa22.51■■□□□ 1.19
CACFD1-205ENST00000489519 OXER1Q8TDS5 423 aa22.51■■□□□ 1.19
CACFD1-205ENST00000489519 TCF25Q9BQ70 676 aa22.51■■□□□ 1.19
CACFD1-205ENST00000489519 GJB4Q9NTQ9 266 aa22.51■■□□□ 1.19
CACFD1-205ENST00000489519 BARX2Q9UMQ3 279 aaPredicted RBP22.51■■□□□ 1.19
CACFD1-205ENST00000489519 CARNS1A5YM72 827 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 BAG4O95429 457 aaKnown RBP22.5■■□□□ 1.19
CACFD1-205ENST00000489519 ATF7P17544 494 aaPredicted RBP22.5■■□□□ 1.19
CACFD1-205ENST00000489519 PHKA2P46019 1235 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 ALDH7A1P49419 539 aaKnown RBP22.5■■□□□ 1.19
CACFD1-205ENST00000489519 EPHA7Q15375 998 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 PLA2G4FQ68DD2 849 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 TWF2Q6IBS0 349 aaKnown RBP22.5■■□□□ 1.19
CACFD1-205ENST00000489519 TMEM184AQ6ZMB5 413 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 C4orf19Q8IY42 314 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 SLFN12Q8IYM2 578 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 HELQQ8TDG4 1101 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 HAS1Q92839 578 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 CEP170P1Q96L14 293 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 BRMS1Q9HCU9 246 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 ENTPD7Q9NQZ7 604 aa22.5■■□□□ 1.19
CACFD1-205ENST00000489519 NPEPPSP55786 919 aa22.49■■□□□ 1.19
CACFD1-205ENST00000489519 PLPP4Q5VZY2 271 aa22.49■■□□□ 1.19
CACFD1-205ENST00000489519 OTUD6AQ7L8S5 288 aa22.49■■□□□ 1.19
CACFD1-205ENST00000489519 CATSPER4Q7RTX7 472 aa22.49■■□□□ 1.19
CACFD1-205ENST00000489519 TMC7Q7Z402 723 aa22.49■■□□□ 1.19
CACFD1-205ENST00000489519 NLRP4Q96MN2 994 aa22.49■■□□□ 1.19
CACFD1-205ENST00000489519 PIN4Q9Y237 131 aaKnown RBP22.49■■□□□ 1.19
CACFD1-205ENST00000489519 USP15Q9Y4E8 981 aaPredicted RBP22.49■■□□□ 1.19
CACFD1-205ENST00000489519 TRIOO75962 3097 aa22.48■■□□□ 1.19
CACFD1-205ENST00000489519 GAS2O43903 313 aaKnown RBP22.48■■□□□ 1.19
CACFD1-205ENST00000489519 ZNF623O75123 536 aa22.48■■□□□ 1.19
CACFD1-205ENST00000489519 KRT2P35908 639 aa22.48■■□□□ 1.19
CACFD1-205ENST00000489519 RFC5P40937 340 aa22.48■■□□□ 1.19
CACFD1-205ENST00000489519 RAB27AP51159 221 aa22.48■■□□□ 1.19
CACFD1-205ENST00000489519 POLGP54098 1239 aaPredicted RBP22.48■■□□□ 1.19
CACFD1-205ENST00000489519 BMS1Q14692 1282 aaKnown RBP22.48■■□□□ 1.19
CACFD1-205ENST00000489519 HERC4Q5GLZ8 1057 aaPredicted RBP22.48■■□□□ 1.19
CACFD1-205ENST00000489519 RNF135Q8IUD6 432 aa22.48■■□□□ 1.19
CACFD1-205ENST00000489519 KSR1Q8IVT5 923 aa22.48■■□□□ 1.19
CACFD1-205ENST00000489519 SLC39A11Q8N1S5 342 aa22.48■■□□□ 1.19
CACFD1-205ENST00000489519 DHX33Q9H6R0 707 aaKnown RBP22.48■■□□□ 1.19
CACFD1-205ENST00000489519 ZSWIM4Q9H7M6 989 aa22.48■■□□□ 1.19
CACFD1-205ENST00000489519 COL4A3BPQ9Y5P4 624 aa22.48■■□□□ 1.19
CACFD1-205ENST00000489519 FDPSP14324 419 aaKnown RBP22.47■■□□□ 1.19
CACFD1-205ENST00000489519 YWHABP31946 246 aaKnown RBP22.47■■□□□ 1.19
CACFD1-205ENST00000489519 PBX3P40426 434 aa22.47■■□□□ 1.19
CACFD1-205ENST00000489519 KCNC3Q14003 757 aa22.47■■□□□ 1.19
CACFD1-205ENST00000489519 GLB1LQ6UWU2 654 aa22.47■■□□□ 1.19
CACFD1-205ENST00000489519 POTEDQ86YR6 584 aa22.47■■□□□ 1.19
CACFD1-205ENST00000489519 NECAB1Q8N987 351 aa22.47■■□□□ 1.19
CACFD1-205ENST00000489519 VN1R2Q8NFZ6 395 aa22.47■■□□□ 1.19
CACFD1-205ENST00000489519 PRPF31Q8WWY3 499 aaKnown RBP22.47■■□□□ 1.19
CACFD1-205ENST00000489519 PSPC1Q8WXF1 523 aaKnown RBP22.47■■□□□ 1.19
CACFD1-205ENST00000489519 GTF3C6Q969F1 213 aa22.47■■□□□ 1.19
CACFD1-205ENST00000489519 LXNQ9BS40 222 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms