RNA–Protein interactions for RNA: ENST00000489388.5

CREM-240, Transcript of cAMP responsive element modulator, human

TSL 2

Gene CREM, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-240	ENST00000489388	ZCCHC14	Q8WYQ9	949 aa	Known RBP	18.21	■□□□□ 0.51
CREM-240	ENST00000489388	TTC14	Q96N46	770 aa		18.21	■□□□□ 0.51
CREM-240	ENST00000489388	ADAM33	Q9BZ11	813 aa		18.21	■□□□□ 0.51
CREM-240	ENST00000489388	CCDC195	A0A1B0GUA6	201 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	PPP1R11	O60927	126 aa	Predicted RBP	18.2	■□□□□ 0.5
CREM-240	ENST00000489388	KLRC2	P26717	231 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	ALDH7A1	P49419	539 aa	Known RBP	18.2	■□□□□ 0.5
CREM-240	ENST00000489388	POLG	P54098	1239 aa	Predicted RBP	18.2	■□□□□ 0.5
CREM-240	ENST00000489388	PRKCQ	Q04759	706 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	DSC3	Q14574	896 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	AASDH	Q4L235	1098 aa	Predicted RBP	18.2	■□□□□ 0.5
CREM-240	ENST00000489388	SLC44A4	Q53GD3	710 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	CLLU1OS	Q5K130	101 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	ZBTB41	Q5SVQ8	909 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	ZNF589	Q86UQ0	364 aa	Predicted RBP	18.2	■□□□□ 0.5
CREM-240	ENST00000489388	CMAS	Q8NFW8	434 aa	Predicted RBP	18.2	■□□□□ 0.5
CREM-240	ENST00000489388	GATA6	Q92908	595 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	CLDN23	Q96B33	292 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	KLHL5	Q96PQ7	755 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	AMN	Q9BXJ7	453 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	RXFP3	Q9NSD7	469 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	WASF3	Q9UPY6	502 aa		18.2	■□□□□ 0.5
CREM-240	ENST00000489388	HIP1	O00291	1037 aa		18.19	■□□□□ 0.5
CREM-240	ENST00000489388	TARS	P26639	723 aa	Known RBP	18.19	■□□□□ 0.5
CREM-240	ENST00000489388	FOXC1	Q12948	553 aa		18.19	■□□□□ 0.5
CREM-240	ENST00000489388	MTAP	Q13126	283 aa		18.19	■□□□□ 0.5
CREM-240	ENST00000489388	PLCB4	Q15147	1175 aa		18.19	■□□□□ 0.5
CREM-240	ENST00000489388	VPS53	Q5VIR6	699 aa		18.19	■□□□□ 0.5
CREM-240	ENST00000489388	PSAPL1	Q6NUJ1	521 aa		18.19	■□□□□ 0.5
CREM-240	ENST00000489388	FAM43B	Q6ZT52	329 aa	Predicted RBP	18.19	■□□□□ 0.5
CREM-240	ENST00000489388	DDX53	Q86TM3	631 aa	Known RBP	18.19	■□□□□ 0.5
CREM-240	ENST00000489388	NME8	Q8N427	588 aa		18.19	■□□□□ 0.5
CREM-240	ENST00000489388	BCL7C	Q8WUZ0	217 aa	Predicted RBP	18.19	■□□□□ 0.5
CREM-240	ENST00000489388	SENP7	Q9BQF6	1050 aa		18.19	■□□□□ 0.5
CREM-240	ENST00000489388	SMARCAD1	Q9H4L7	1026 aa		18.19	■□□□□ 0.5
CREM-240	ENST00000489388	SMIM35	A0A1B0GVV1	85 aa		18.18	■□□□□ 0.5
CREM-240	ENST00000489388	GPR182	O15218	404 aa		18.18	■□□□□ 0.5
CREM-240	ENST00000489388	FOXD2	O60548	495 aa	Predicted RBP	18.18	■□□□□ 0.5
CREM-240	ENST00000489388	STAM2	O75886	525 aa		18.18	■□□□□ 0.5
CREM-240	ENST00000489388	TOP3B	O95985	862 aa	Known RBP	18.18	■□□□□ 0.5
CREM-240	ENST00000489388	MYB	P10242	640 aa		18.18	■□□□□ 0.5
CREM-240	ENST00000489388	SIM2	Q14190	667 aa	Predicted RBP	18.18	■□□□□ 0.5
CREM-240	ENST00000489388	SF3A2	Q15428	464 aa	Known RBP	18.18	■□□□□ 0.5
CREM-240	ENST00000489388	GET4	Q7L5D6	327 aa	Predicted RBP	18.18	■□□□□ 0.5
CREM-240	ENST00000489388	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.18	■□□□□ 0.5
CREM-240	ENST00000489388	FAM228A	Q86W67	206 aa		18.18	■□□□□ 0.5
CREM-240	ENST00000489388	RNF169	Q8NCN4	708 aa		18.18	■□□□□ 0.5
CREM-240	ENST00000489388	SEPT1	Q8WYJ6	367 aa		18.18	■□□□□ 0.5
CREM-240	ENST00000489388	MAN1C1	Q9NR34	630 aa		18.18	■□□□□ 0.5
CREM-240	ENST00000489388	INPPL1	O15357	1258 aa		18.17	■□□□□ 0.5
CREM-240	ENST00000489388	CNP	P09543	421 aa	Known RBP	18.17	■□□□□ 0.5
CREM-240	ENST00000489388	RPS9	P46781	194 aa	Known RBP	18.17	■□□□□ 0.5
CREM-240	ENST00000489388	NRL	P54845	237 aa		18.17	■□□□□ 0.5
CREM-240	ENST00000489388	CCDC6	Q16204	474 aa		18.17	■□□□□ 0.5
CREM-240	ENST00000489388	ODR4	Q5SWX8	454 aa		18.17	■□□□□ 0.5
CREM-240	ENST00000489388	HELQ	Q8TDG4	1101 aa		18.17	■□□□□ 0.5
CREM-240	ENST00000489388	SMG7	Q92540	1137 aa	Known RBP	18.17	■□□□□ 0.5
CREM-240	ENST00000489388	FGF14	Q92915	247 aa		18.17	■□□□□ 0.5
CREM-240	ENST00000489388	VN1R3	Q9BXE9	311 aa		18.17	■□□□□ 0.5
CREM-240	ENST00000489388	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.16	■□□□□ 0.5
CREM-240	ENST00000489388	ATP9A	O75110	1047 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	RFPL2	O75678	378 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	POLR2M	P0CAP2	368 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	FZD5	Q13467	585 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	PARM1	Q6UWI2	310 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	ECHDC2	Q86YB7	292 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	SAMD3	Q8N6K7	520 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	KIF12	Q96FN5	646 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	IGSF21	Q96ID5	467 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	PPP1R16B	Q96T49	567 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	PCYT2	Q99447	389 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	ZKSCAN3	Q9BRR0	538 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	LSM14B	Q9BX40	385 aa	Known RBP	18.16	■□□□□ 0.5
CREM-240	ENST00000489388	EMILIN2	Q9BXX0	1053 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.16	■□□□□ 0.5
CREM-240	ENST00000489388	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	18.16	■□□□□ 0.5
CREM-240	ENST00000489388	FRMPD4	Q14CM0	1322 aa		18.16	■□□□□ 0.5
CREM-240	ENST00000489388	ADAMTS20	P59510	1910 aa		18.15	■□□□□ 0.5
CREM-240	ENST00000489388	ZC3H11A	O75152	810 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
CREM-240	ENST00000489388	SSB	P05455	408 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
CREM-240	ENST00000489388	MFAP1	P55081	439 aa	Known RBP	18.15	■□□□□ 0.5
CREM-240	ENST00000489388	SRSF5	Q13243	272 aa	Known RBP	18.15	■□□□□ 0.5
CREM-240	ENST00000489388	ASPRV1	Q53RT3	343 aa		18.15	■□□□□ 0.5
CREM-240	ENST00000489388	STPG1	Q5TH74	334 aa		18.15	■□□□□ 0.5
CREM-240	ENST00000489388	MTHFD1L	Q6UB35	978 aa		18.15	■□□□□ 0.5
CREM-240	ENST00000489388	RSPO2	Q6UXX9	243 aa	Predicted RBP	18.15	■□□□□ 0.5
CREM-240	ENST00000489388	CYP26C1	Q6V0L0	522 aa		18.15	■□□□□ 0.5
CREM-240	ENST00000489388	PNMA1	Q8ND90	353 aa		18.15	■□□□□ 0.5
CREM-240	ENST00000489388	ZNF707	Q96C28	371 aa	Predicted RBP	18.15	■□□□□ 0.5
CREM-240	ENST00000489388	RHOBTB2	Q9BYZ6	727 aa		18.15	■□□□□ 0.5
CREM-240	ENST00000489388	GREB1	Q4ZG55	1949 aa		18.14	■□□□□ 0.49
CREM-240	ENST00000489388	HR	O43593	1189 aa		18.14	■□□□□ 0.49
CREM-240	ENST00000489388	CHML	P26374	656 aa		18.14	■□□□□ 0.49
CREM-240	ENST00000489388	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.14	■□□□□ 0.49
CREM-240	ENST00000489388	OSMR	Q99650	979 aa		18.14	■□□□□ 0.49
CREM-240	ENST00000489388	IL25	Q9H293	177 aa		18.14	■□□□□ 0.49
CREM-240	ENST00000489388	GIPC1	O14908	333 aa		18.13	■□□□□ 0.49
CREM-240	ENST00000489388	NCAM2	O15394	837 aa		18.13	■□□□□ 0.49
CREM-240	ENST00000489388	KCNA2	P16389	499 aa		18.13	■□□□□ 0.49
CREM-240	ENST00000489388	BMP2KL	Q5H9B9	411 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms