RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SSBP05455 408 aaKnown RBP eCLIP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 MAPTP10636 758 aaKnown RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 GUCY2CP25092 1073 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 ARHGAP25P42331 645 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 ZNF131P52739 623 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 SNRPFP62306 86 aaKnown RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 HERVK_113P62684 666 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 FAM193AP78312 1265 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 SP3Q02447 781 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 COG2Q14746 738 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 PKN2Q16513 984 aaKnown RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 FAM110CQ1W6H9 321 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 CCDC40Q4G0X9 1142 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 ARSHQ5FYA8 562 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 PCNX4Q63HM2 1172 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 RSRC2Q7L4I2 434 aaKnown RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 SRGAP1Q7Z6B7 1085 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 CTU1Q7Z7A3 348 aaKnown RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 SPICE1Q8N0Z3 855 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 REPS2Q8NFH8 660 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 RDM1Q8NG50 284 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 GTF3C2Q8WUA4 911 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 LRRN4Q8WUT4 740 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 SCFD1Q8WVM8 642 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 GOLGA1Q92805 767 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 CCDC42Q96M95 316 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 SLF1Q9BQI6 1058 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 DESI2Q9BSY9 194 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 TEKT3Q9BXF9 490 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 RPAP3Q9H6T3 665 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 TXNRD2Q9NNW7 524 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 LZTFL1Q9NQ48 299 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 PLCB1Q9NQ66 1216 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 TYW1Q9NV66 732 aaKnown RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 OGFRQ9NZT2 677 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 BZW2Q9Y6E2 419 aaKnown RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 RBAK-RBAKDNI3L0D1 243 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 MAFGO15525 162 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 GAS7O60861 476 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 GNRH1P01148 92 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 PRLRP16471 622 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 MCM3P25205 808 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 HOXA13P31271 388 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-207ENST00000489357 VAV2P52735 878 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 LACTBP83111 547 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-207ENST00000489357 KIF5AQ12840 1032 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 ARHGEF6Q15052 776 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 ELF2Q15723 593 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 ZYXQ15942 572 aaKnown RBP9.28□□□□□ -0.92
VTI1A-207ENST00000489357 C10orf76Q5T2E6 689 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 IQCEQ6IPM2 695 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 MSL3Q8N5Y2 521 aaKnown RBP9.28□□□□□ -0.92
VTI1A-207ENST00000489357 CCDC155Q8N6L0 562 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 TRIM58Q8NG06 486 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 PURBQ96QR8 312 aaKnown RBP9.28□□□□□ -0.92
VTI1A-207ENST00000489357 REEP2Q9BRK0 252 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 MXRA8Q9BRK3 442 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 NHEJ1Q9H9Q4 299 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-207ENST00000489357 SLC38A10Q9HBR0 1119 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 TBC1D22BQ9NU19 505 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 EVA1BQ9NVM1 165 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 HOXC10Q9NYD6 342 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 CPA4Q9UI42 421 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 DBR1Q9UK59 544 aaKnown RBP9.28□□□□□ -0.92
VTI1A-207ENST00000489357 CCPG1Q9ULG6 757 aa9.28□□□□□ -0.92
VTI1A-207ENST00000489357 KIAA0100Q14667 2235 aaKnown RBP9.27□□□□□ -0.93
VTI1A-207ENST00000489357 CCDC151A5D8V7 595 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 RNF225M0QZC1 329 aaPredicted RBP9.27□□□□□ -0.93
VTI1A-207ENST00000489357 IPO5O00410 1097 aaKnown RBP9.27□□□□□ -0.93
VTI1A-207ENST00000489357 FANCGO15287 622 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 PJA2O43164 708 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 COBLO75128 1261 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 STAM2O75886 525 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 SLITRK3O94933 977 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 SERPING1P05155 500 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 SCP2P22307 547 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 NR2F2P24468 414 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 ABCD1P33897 745 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 ITIH3Q06033 890 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 CKAP4Q07065 602 aaKnown RBP9.27□□□□□ -0.93
VTI1A-207ENST00000489357 KCNH2Q12809 1159 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 ADAM9Q13443 819 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 BMS1Q14692 1282 aaKnown RBP9.27□□□□□ -0.93
VTI1A-207ENST00000489357 PTPN21Q16825 1174 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 SLC9C1Q4G0N8 1177 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 ZNF569Q5MCW4 686 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 CCDC122Q5T0U0 273 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 PAPD7Q5XG87 772 aaKnown RBP9.27□□□□□ -0.93
VTI1A-207ENST00000489357 C1orf186Q6ZWK4 172 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 CACNA2D4Q7Z3S7 1137 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 KIAA1328Q86T90 577 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 RNF10Q8N5U6 811 aaKnown RBP9.27□□□□□ -0.93
VTI1A-207ENST00000489357 CD99L2Q8TCZ2 262 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 UBE2Q2Q8WVN8 375 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 HNRNPLLQ8WVV9 542 aaKnown RBP9.27□□□□□ -0.93
VTI1A-207ENST00000489357 BAP1Q92560 729 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 RUBCNQ92622 972 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 JAKMIP2Q96AA8 810 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 VTI1AQ96AJ9 217 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms