RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 WTAPQ15007 396 aa13.24□□□□□ -0.29
HDAC6-233ENST00000489352 STPG1Q5TH74 334 aa13.24□□□□□ -0.29
HDAC6-233ENST00000489352 MTHFD1LQ6UB35 978 aa13.24□□□□□ -0.29
HDAC6-233ENST00000489352 ZNF852Q6ZMS4 543 aa13.24□□□□□ -0.29
HDAC6-233ENST00000489352 CLDN23Q96B33 292 aa13.24□□□□□ -0.29
HDAC6-233ENST00000489352 IGSF21Q96ID5 467 aa13.24□□□□□ -0.29
HDAC6-233ENST00000489352 CDHR1Q96JP9 859 aa13.24□□□□□ -0.29
HDAC6-233ENST00000489352 ZKSCAN3Q9BRR0 538 aa13.24□□□□□ -0.29
HDAC6-233ENST00000489352 MRPL17Q9NRX2 175 aaKnown RBP13.24□□□□□ -0.29
HDAC6-233ENST00000489352 SMG1Q96Q15 3661 aaKnown RBP13.24□□□□□ -0.29
HDAC6-233ENST00000489352 BPTFQ12830 3046 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 MYBP10242 640 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 NCLP19338 710 aaKnown RBP13.23□□□□□ -0.29
HDAC6-233ENST00000489352 SPINK2P20155 84 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 NOVA1P51513 510 aaKnown RBP13.23□□□□□ -0.29
HDAC6-233ENST00000489352 CRYBB1P53674 252 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-233ENST00000489352 RNASELQ05823 741 aaKnown RBP13.23□□□□□ -0.29
HDAC6-233ENST00000489352 SOWAHCQ53LP3 525 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-233ENST00000489352 CCDC178Q5BJE1 867 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 MFSD6Q6ZSS7 791 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 TPRG1Q6ZUI0 275 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 CEP68Q76N32 757 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 DGKHQ86XP1 1220 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 TMEM40Q8WWA1 233 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 MAP4K1Q92918 833 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 PPP1R16BQ96T49 567 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 LSM14BQ9BX40 385 aaKnown RBP13.23□□□□□ -0.29
HDAC6-233ENST00000489352 RHOBTB2Q9BYZ6 727 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 COL4A3Q01955 1670 aa13.23□□□□□ -0.29
HDAC6-233ENST00000489352 ZBTB5O15062 677 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 ADH1AP07327 375 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 TARSP26639 723 aaKnown RBP13.22□□□□□ -0.29
HDAC6-233ENST00000489352 KLRC1P26715 233 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 CNR2P34972 360 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 CCR3P51677 355 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 ADCY1Q08828 1119 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 SF3A2Q15428 464 aaKnown RBP13.22□□□□□ -0.29
HDAC6-233ENST00000489352 KIZQ2M2Z5 673 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 CLLU1OSQ5K130 101 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 MTSS1LQ765P7 747 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 FAM228AQ86W67 206 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 IQCA1Q86XH1 822 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 ESR2Q92731 530 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 FGF14Q92915 247 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 OSMRQ99650 979 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 RNF19AQ9NV58 838 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 SDK1Q7Z5N4 2213 aa13.22□□□□□ -0.29
HDAC6-233ENST00000489352 C2CD2LO14523 706 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 SMARCA5O60264 1052 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-233ENST00000489352 RFPL2O75678 378 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 GLUD1P00367 558 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 RLBP1P12271 317 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 AK2P54819 239 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 ZNF252P-AS1Q0IIN9 211 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 DSC3Q14574 896 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 ZMYM1Q5SVZ6 1142 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 PARM1Q6UWI2 310 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 TMEM173Q86WV6 379 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-233ENST00000489352 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 MIER1Q8N108 512 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 RPP25Q9BUL9 199 aaKnown RBP13.21□□□□□ -0.29
HDAC6-233ENST00000489352 RXFP3Q9NSD7 469 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 PKD2L1Q9P0L9 805 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 SSX2IPQ9Y2D8 614 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 SPAG17Q6Q759 2223 aa13.21□□□□□ -0.29
HDAC6-233ENST00000489352 AXIN1O15169 862 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 FSHRP23945 695 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 PCNX4Q63HM2 1172 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 KIAA0319LQ8IZA0 1049 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 SMARCC2Q8TAQ2 1214 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 RSPH1Q8WYR4 309 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 CUL5Q93034 780 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 GPRASP2Q96D09 838 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 IER2Q9BTL4 223 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 SCNM1Q9BWG6 230 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 GBP3Q9H0R5 595 aa13.2□□□□□ -0.3
HDAC6-233ENST00000489352 NDRG2Q9UN36 371 aaKnown RBP13.2□□□□□ -0.3
HDAC6-233ENST00000489352 BAZ2BQ9UIF8 2168 aaKnown RBP13.2□□□□□ -0.3
HDAC6-233ENST00000489352 LOC400499M0QZD8 3231 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 LAMA5O15230 3695 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 HRO43593 1189 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-233ENST00000489352 ATP9AO75110 1047 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 URODP06132 367 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 ZNF806P0C7X5 589 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
HDAC6-233ENST00000489352 KCNA2P16389 499 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 CXCL12P48061 93 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 STAT5BP51692 787 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 RNF43Q68DV7 783 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-233ENST00000489352 GATA6Q92908 595 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 PHF20Q9BVI0 1012 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 ARRDC1-AS1Q9H2J1 176 aa13.19□□□□□ -0.3
HDAC6-233ENST00000489352 RNF41Q9H4P4 317 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-233ENST00000489352 DOCK6Q96HP0 2047 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 FRMPD4Q14CM0 1322 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 A0A0U1RQF3 1178 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms