RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 A0A087WZ62 844 aa15.06■□□□□ 0
LMO4-203ENST00000489303 POTEMA6NI47 508 aa15.06■□□□□ 0
LMO4-203ENST00000489303 GRM6O15303 877 aa15.06■□□□□ 0
LMO4-203ENST00000489303 GTF2F1P35269 517 aaKnown RBP eCLIP15.06■□□□□ 05e-11■■■■□ 24.4
LMO4-203ENST00000489303 GATMP50440 423 aa15.06■□□□□ 0
LMO4-203ENST00000489303 DRP2Q13474 957 aa15.06■□□□□ 0
LMO4-203ENST00000489303 PTPROQ16827 1216 aa15.06■□□□□ 0
LMO4-203ENST00000489303 LEXMQ3ZCV2 418 aa15.06■□□□□ 0
LMO4-203ENST00000489303 HAUS3Q68CZ6 603 aa15.06■□□□□ 0
LMO4-203ENST00000489303 CMTR2Q8IYT2 770 aaKnown RBP15.06■□□□□ 0
LMO4-203ENST00000489303 ZNF689Q96CS4 500 aaPredicted RBP15.06■□□□□ 0
LMO4-203ENST00000489303 NLRP4Q96MN2 994 aa15.06■□□□□ 0
LMO4-203ENST00000489303 MTRQ99707 1265 aa15.06■□□□□ 0
LMO4-203ENST00000489303 FDXACB1Q9BRP7 624 aaPredicted RBP15.06■□□□□ 0
LMO4-203ENST00000489303 LRFN3Q9BTN0 628 aa15.06■□□□□ 0
LMO4-203ENST00000489303 RAB34Q9BZG1 259 aa15.06■□□□□ 0
LMO4-203ENST00000489303 ATP6V0A4Q9HBG4 840 aa15.06■□□□□ 0
LMO4-203ENST00000489303 TUFT1Q9NNX1 390 aa15.06■□□□□ 0
LMO4-203ENST00000489303 DACT1Q9NYF0 836 aa15.06■□□□□ 0
LMO4-203ENST00000489303 COL4A3BPQ9Y5P4 624 aa15.06■□□□□ 0
LMO4-203ENST00000489303 STK24Q9Y6E0 443 aa15.06■□□□□ 0
LMO4-203ENST00000489303 ASAP2O43150 1006 aa15.05■□□□□ -0
LMO4-203ENST00000489303 MGEA5O60502 916 aa15.05■□□□□ -0
LMO4-203ENST00000489303 DGAT1O75907 488 aa15.05■□□□□ -0
LMO4-203ENST00000489303 RB1P06400 928 aa15.05■□□□□ -0
LMO4-203ENST00000489303 XRCC6P12956 609 aaKnown RBP eCLIP15.05■□□□□ -0
LMO4-203ENST00000489303 CTNNB1P35222 781 aa15.05■□□□□ -0
LMO4-203ENST00000489303 EMC2Q15006 297 aa15.05■□□□□ -0
LMO4-203ENST00000489303 RILPL1Q5EBL4 403 aa15.05■□□□□ -0
LMO4-203ENST00000489303 LARP1BQ659C4 914 aaKnown RBP15.05■□□□□ -0
LMO4-203ENST00000489303 EP400NLQ6ZTU2 488 aa15.05■□□□□ -0
LMO4-203ENST00000489303 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
LMO4-203ENST00000489303 TMEM143Q96AN5 459 aa15.05■□□□□ -0
LMO4-203ENST00000489303 ELAC1Q9H777 363 aaKnown RBP15.05■□□□□ -0
LMO4-203ENST00000489303 CHST12Q9NRB3 414 aa15.05■□□□□ -0
LMO4-203ENST00000489303 BMP2KQ9NSY1 1161 aaPredicted RBP15.05■□□□□ -0
LMO4-203ENST00000489303 TMEM161AQ9NX61 479 aa15.05■□□□□ -0
LMO4-203ENST00000489303 RALGAPA2Q2PPJ7 1873 aa15.05■□□□□ -0
LMO4-203ENST00000489303 KIAA1671Q9BY89 1806 aa15.04■□□□□ -0
LMO4-203ENST00000489303 C9IYK1 514 aa15.04■□□□□ -0
LMO4-203ENST00000489303 LAD1O00515 517 aa15.04■□□□□ -0
LMO4-203ENST00000489303 HOXA2O43364 376 aa15.04■□□□□ -0
LMO4-203ENST00000489303 BMPR1AP36894 532 aa15.04■□□□□ -0
LMO4-203ENST00000489303 LTBRP36941 435 aa15.04■□□□□ -0
LMO4-203ENST00000489303 DLX2Q07687 328 aaPredicted RBP15.04■□□□□ -0
LMO4-203ENST00000489303 DSC3Q14574 896 aa15.04■□□□□ -0
LMO4-203ENST00000489303 MXD4Q14582 209 aaPredicted RBP15.04■□□□□ -0
LMO4-203ENST00000489303 PAN2Q504Q3 1202 aaKnown RBP15.04■□□□□ -0
LMO4-203ENST00000489303 PTCRAQ6ISU1 281 aaPredicted RBP15.04■□□□□ -0
LMO4-203ENST00000489303 CATSPER4Q7RTX7 472 aa15.04■□□□□ -0
LMO4-203ENST00000489303 FAM178BQ8IXR5 827 aa15.04■□□□□ -0
LMO4-203ENST00000489303 CRIPAKQ8N1N5 446 aa15.04■□□□□ -0
LMO4-203ENST00000489303 PRPF31Q8WWY3 499 aaKnown RBP15.04■□□□□ -0
LMO4-203ENST00000489303 NACC1Q96RE7 527 aa15.04■□□□□ -0
LMO4-203ENST00000489303 C11orf84Q9BUA3 381 aaPredicted RBP15.04■□□□□ -0
LMO4-203ENST00000489303 POLR3CQ9BUI4 534 aaPredicted RBP15.04■□□□□ -0
LMO4-203ENST00000489303 ALG13Q9NP73 1137 aaKnown RBP15.04■□□□□ -0
LMO4-203ENST00000489303 LRWD1Q9UFC0 647 aa15.04■□□□□ -0
LMO4-203ENST00000489303 TTC3P53804 2025 aa15.04■□□□□ -0
LMO4-203ENST00000489303 GRXCR2A6NFK2 248 aa15.03■□□□□ -0
LMO4-203ENST00000489303 TBKBP1A7MCY6 615 aa15.03■□□□□ -0
LMO4-203ENST00000489303 ZBTB39O15060 712 aa15.03■□□□□ -0
LMO4-203ENST00000489303 SRGAP2CP0DJJ0 459 aa15.03■□□□□ -0
LMO4-203ENST00000489303 PDCP20941 246 aa15.03■□□□□ -0
LMO4-203ENST00000489303 FGFR4P22455 802 aa15.03■□□□□ -0
LMO4-203ENST00000489303 FXR2P51116 673 aaKnown RBP eCLIP15.03■□□□□ -0
LMO4-203ENST00000489303 FAM189BP81408 668 aa15.03■□□□□ -0
LMO4-203ENST00000489303 LAMTOR4Q0VGL1 99 aa15.03■□□□□ -0
LMO4-203ENST00000489303 PTGDRQ13258 359 aa15.03■□□□□ -0
LMO4-203ENST00000489303 CAMK1Q14012 370 aa15.03■□□□□ -0
LMO4-203ENST00000489303 TFDP1Q14186 410 aa15.03■□□□□ -0
LMO4-203ENST00000489303 NBR1Q14596 966 aa15.03■□□□□ -0
LMO4-203ENST00000489303 CLUL1Q15846 466 aa15.03■□□□□ -0
LMO4-203ENST00000489303 SPOUT1Q5T280 376 aaKnown RBP15.03■□□□□ -0
LMO4-203ENST00000489303 SRGAP1Q7Z6B7 1085 aa15.03■□□□□ -0
LMO4-203ENST00000489303 CATSPER3Q86XQ3 398 aa15.03■□□□□ -0
LMO4-203ENST00000489303 KSR1Q8IVT5 923 aa15.03■□□□□ -0
LMO4-203ENST00000489303 ABI1Q8IZP0 508 aa15.03■□□□□ -0
LMO4-203ENST00000489303 PIGOQ8TEQ8 1089 aa15.03■□□□□ -0
LMO4-203ENST00000489303 CLP1Q92989 425 aaKnown RBP15.03■□□□□ -0
LMO4-203ENST00000489303 PLVAPQ9BX97 442 aa15.03■□□□□ -0
LMO4-203ENST00000489303 C1QTNF1Q9BXJ1 281 aa15.03■□□□□ -0
LMO4-203ENST00000489303 AAASQ9NRG9 546 aa15.03■□□□□ -0
LMO4-203ENST00000489303 PCDHB6Q9Y5E3 794 aa15.03■□□□□ -0
LMO4-203ENST00000489303 MRPL42Q9Y6G3 142 aaKnown RBP15.03■□□□□ -0
LMO4-203ENST00000489303 EVPLQ92817 2033 aa15.03■□□□□ -0
LMO4-203ENST00000489303 C5orf67F2Z3F1 127 aa15.02■□□□□ -0
LMO4-203ENST00000489303 LINC01565O15544 149 aa15.02■□□□□ -0
LMO4-203ENST00000489303 CSDE1O75534 798 aaKnown RBP15.02■□□□□ -0
LMO4-203ENST00000489303 SPATA31C1P0DKV0 1188 aa15.02■□□□□ -0
LMO4-203ENST00000489303 SKIP12755 728 aa15.02■□□□□ -0
LMO4-203ENST00000489303 MUTP22033 750 aa15.02■□□□□ -0
LMO4-203ENST00000489303 DNAJB1P25685 340 aa15.02■□□□□ -0
LMO4-203ENST00000489303 RPA1P27694 616 aa15.02■□□□□ -0
LMO4-203ENST00000489303 CCT6AP40227 531 aaKnown RBP15.02■□□□□ -0
LMO4-203ENST00000489303 PHKA2P46019 1235 aa15.02■□□□□ -0
LMO4-203ENST00000489303 RARRES1P49788 294 aa15.02■□□□□ -0
LMO4-203ENST00000489303 TOB1P50616 345 aaPredicted RBP15.02■□□□□ -0
LMO4-203ENST00000489303 NCBP1Q09161 790 aaKnown RBP15.02■□□□□ -0
LMO4-203ENST00000489303 HYAL1Q12794 435 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms