RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CA8P35219 290 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 PPM1AP35813 382 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 CCT6AP40227 531 aaKnown RBP10.16□□□□□ -0.78
HDAC6-232ENST00000489053 GATMP50440 423 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 RAB27AP51159 221 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 RNASELQ05823 741 aaKnown RBP10.16□□□□□ -0.78
HDAC6-232ENST00000489053 LAMTOR4Q0VGL1 99 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 ST3GAL1Q11201 340 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 DRP2Q13474 957 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 BMS1Q14692 1282 aaKnown RBP10.16□□□□□ -0.78
HDAC6-232ENST00000489053 GLB1LQ6UWU2 654 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 SRGAP1Q7Z6B7 1085 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 HACE1Q8IYU2 909 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 RNF149Q8NC42 400 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 ADAMTS19Q8TE59 1207 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 CLP1Q92989 425 aaKnown RBP10.16□□□□□ -0.78
HDAC6-232ENST00000489053 ZNF689Q96CS4 500 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-232ENST00000489053 PGBD4Q96DM1 585 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 TMX3Q96JJ7 454 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 TBC1D32Q96NH3 1257 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 NACC1Q96RE7 527 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 UHRF1Q96T88 793 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-232ENST00000489053 KIF2CQ99661 725 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 ALG13Q9NP73 1137 aaKnown RBP10.16□□□□□ -0.78
HDAC6-232ENST00000489053 GBF1Q92538 1859 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 IGKV6-21A0A0C4DH24 114 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 CARNS1A5YM72 827 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 C9IYK1 514 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 LAD1O00515 517 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 USO1O60763 962 aaKnown RBP10.15□□□□□ -0.78
HDAC6-232ENST00000489053 SLITRK3O94933 977 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 LYPLA2O95372 231 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 EOMESO95936 686 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 KCNA5P22460 613 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 GJB2P29033 226 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 TFF2Q03403 129 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 KRT17Q04695 432 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 SPIRE1Q08AE8 756 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 FAM102BQ5T8I3 360 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 DTHD1Q6ZMT9 781 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 ECHDC2Q86YB7 292 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 KSR1Q8IVT5 923 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 KLHL23Q8NBE8 558 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 MCPH1Q8NEM0 835 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 URGCPQ8TCY9 931 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 PIGOQ8TEQ8 1089 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 RSPH1Q8WYR4 309 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 P2RX5Q93086 422 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 CDK5RAP3Q96JB5 506 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 ZNF558Q96NG5 402 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 MTMR9Q96QG7 549 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 HSD17B14Q9BPX1 270 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 TRIM6Q9C030 488 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-232ENST00000489053 TMEM60Q9H2L4 133 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 IGFLR1Q9H665 355 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 DHX33Q9H6R0 707 aaKnown RBP10.15□□□□□ -0.78
HDAC6-232ENST00000489053 UBE2ZQ9H832 354 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-232ENST00000489053 TUFT1Q9NNX1 390 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 CLDND1Q9NY35 253 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 LRWD1Q9UFC0 647 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 MICAL3Q7RTP6 2002 aa10.15□□□□□ -0.78
HDAC6-232ENST00000489053 PRRC2BQ5JSZ5 2229 aaKnown RBP10.15□□□□□ -0.78
HDAC6-232ENST00000489053 VCANP13611 3396 aa10.15□□□□□ -0.79
HDAC6-232ENST00000489053 A0A0U1RQF3 1178 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 LRRIQ4A6NIV6 560 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 GRM6O15303 877 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 STBD1O95210 358 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 SRGAP2BP0DMP2 458 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 XRCC6P12956 609 aaKnown RBP eCLIP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 PDCP20941 246 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 ALDH7A1P49419 539 aaKnown RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 DSC3Q14574 896 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 PCBP1Q15365 356 aaKnown RBP eCLIP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 ZRSR1Q15695 479 aaKnown RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 RILPL1Q5EBL4 403 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 TCEAL5Q5H9L2 206 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 KRT79Q5XKE5 535 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 LARP1BQ659C4 914 aaKnown RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 NOTUMQ6P988 496 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 MAEAQ7L5Y9 396 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 FERMT3Q86UX7 667 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 ZBTB8OSQ8IWT0 167 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 ZNF579Q8NAF0 562 aaKnown RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 RASSF8Q8NHQ8 419 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 HELQQ8TDG4 1101 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 SNX29Q8TEQ0 813 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 FAM193BQ96PV7 902 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 POLR3CQ9BUI4 534 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 POLR3FQ9H1D9 316 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 RC3H2Q9HBD1 1191 aaKnown RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 ENTPD7Q9NQZ7 604 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 TYW1Q9NV66 732 aaKnown RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 WRAP73Q9P2S5 460 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 PLAGL2Q9UPG8 496 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 INPP5FQ9Y2H2 1132 aa10.14□□□□□ -0.79
HDAC6-232ENST00000489053 MYH9P35579 1960 aaKnown RBP10.14□□□□□ -0.79
HDAC6-232ENST00000489053 XIRP2A4UGR9 3374 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 COL4A6Q14031 1691 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 FSD2A1L4K1 749 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 VPS37CA5D8V6 355 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms