RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 JPH2Q9BR39 696 aaPredicted RBP29.18■■■□□ 2.26
RNF220-216ENST00000488865 PHF20Q9BVI0 1012 aa29.18■■■□□ 2.26
RNF220-216ENST00000488865 TRAIPQ9BWF2 469 aa29.18■■■□□ 2.26
RNF220-216ENST00000488865 INO80BQ9C086 356 aaPredicted RBP29.18■■■□□ 2.26
RNF220-216ENST00000488865 KCNJ14Q9UNX9 436 aa29.18■■■□□ 2.26
RNF220-216ENST00000488865 CCDC194A0A1B0GVG4 234 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 LOC730098B7Z3J9 87 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 SLC37A4O43826 429 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 SRGAP2BP0DMP2 458 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 ATF7P17544 494 aaPredicted RBP29.17■■■□□ 2.26
RNF220-216ENST00000488865 SFPQP23246 707 aaKnown RBP eCLIP29.17■■■□□ 2.26
RNF220-216ENST00000488865 HOXD11P31277 338 aaPredicted RBP29.17■■■□□ 2.26
RNF220-216ENST00000488865 SCRN1Q12765 414 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 PPP2R5CQ13362 524 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 KCNC3Q14003 757 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 CBX2Q14781 532 aaPredicted RBP29.17■■■□□ 2.26
RNF220-216ENST00000488865 LETM2Q2VYF4 491 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 PLPP4Q5VZY2 271 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 ANO5Q75V66 913 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 SH2D3AQ9BRG2 576 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 MRPL9Q9BYD2 267 aaKnown RBP29.17■■■□□ 2.26
RNF220-216ENST00000488865 KCNMB3Q9NPA1 279 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 ENTPD7Q9NQZ7 604 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 SUCLA2Q9P2R7 463 aaPredicted RBP29.17■■■□□ 2.26
RNF220-216ENST00000488865 STK36Q9NRP7 1315 aa29.17■■■□□ 2.26
RNF220-216ENST00000488865 A0A087WZ62 844 aa29.16■■■□□ 2.26
RNF220-216ENST00000488865 CSDE1O75534 798 aaKnown RBP29.16■■■□□ 2.26
RNF220-216ENST00000488865 GCFC2P16383 781 aaKnown RBP29.16■■■□□ 2.26
RNF220-216ENST00000488865 XBP1P17861 261 aa29.16■■■□□ 2.26
RNF220-216ENST00000488865 RBM10P98175 930 aaKnown RBP29.16■■■□□ 2.26
RNF220-216ENST00000488865 PPP4R3AQ6IN85 833 aa29.16■■■□□ 2.26
RNF220-216ENST00000488865 NEK8Q86SG6 692 aa29.16■■■□□ 2.26
RNF220-216ENST00000488865 SUSD6Q92537 303 aa29.16■■■□□ 2.26
RNF220-216ENST00000488865 FDXACB1Q9BRP7 624 aaPredicted RBP29.16■■■□□ 2.26
RNF220-216ENST00000488865 PHF7Q9BWX1 381 aaPredicted RBP29.16■■■□□ 2.26
RNF220-216ENST00000488865 SLKQ9H2G2 1235 aaPredicted RBP29.16■■■□□ 2.26
RNF220-216ENST00000488865 DKC1O60832 514 aaKnown RBP eCLIP29.15■■■□□ 2.26
RNF220-216ENST00000488865 PBX3P40426 434 aa29.15■■■□□ 2.26
RNF220-216ENST00000488865 HELQQ8TDG4 1101 aa29.15■■■□□ 2.26
RNF220-216ENST00000488865 VAV3Q9UKW4 847 aa29.15■■■□□ 2.26
RNF220-216ENST00000488865 EML1O00423 815 aa29.14■■■□□ 2.26
RNF220-216ENST00000488865 SKIP12755 728 aa29.14■■■□□ 2.26
RNF220-216ENST00000488865 PHKA2P46019 1235 aa29.14■■■□□ 2.26
RNF220-216ENST00000488865 QARSP47897 775 aaKnown RBP29.14■■■□□ 2.26
RNF220-216ENST00000488865 RHPN2Q8IUC4 686 aa29.14■■■□□ 2.26
RNF220-216ENST00000488865 SLC39A11Q8N1S5 342 aa29.14■■■□□ 2.26
RNF220-216ENST00000488865 EDAQ92838 391 aa29.14■■■□□ 2.26
RNF220-216ENST00000488865 CYP26B1Q9NR63 512 aa29.14■■■□□ 2.26
RNF220-216ENST00000488865 PPME1Q9Y570 386 aa29.14■■■□□ 2.26
RNF220-216ENST00000488865 HIDE1A8MVS5 230 aa29.13■■■□□ 2.25
RNF220-216ENST00000488865 PFKFB2O60825 505 aa29.13■■■□□ 2.25
RNF220-216ENST00000488865 TMC7Q7Z402 723 aa29.13■■■□□ 2.25
RNF220-216ENST00000488865 NAP1L4Q99733 375 aaKnown RBP29.13■■■□□ 2.25
RNF220-216ENST00000488865 KCNH6Q9H252 994 aa29.13■■■□□ 2.25
RNF220-216ENST00000488865 MUC6Q6W4X9 2439 aa29.12■■■□□ 2.25
RNF220-216ENST00000488865 CARNS1A5YM72 827 aa29.12■■■□□ 2.25
RNF220-216ENST00000488865 TBX3O15119 743 aa29.12■■■□□ 2.25
RNF220-216ENST00000488865 P4HBP07237 508 aaKnown RBP29.12■■■□□ 2.25
RNF220-216ENST00000488865 ALDH7A1P49419 539 aaKnown RBP29.12■■■□□ 2.25
RNF220-216ENST00000488865 PLA2G4FQ68DD2 849 aa29.12■■■□□ 2.25
RNF220-216ENST00000488865 TWF2Q6IBS0 349 aaKnown RBP29.12■■■□□ 2.25
RNF220-216ENST00000488865 ANKRD54Q6NXT1 300 aa29.12■■■□□ 2.25
RNF220-216ENST00000488865 HFE2Q6ZVN8 426 aa29.12■■■□□ 2.25
RNF220-216ENST00000488865 EXOC8Q8IYI6 725 aa29.12■■■□□ 2.25
RNF220-216ENST00000488865 S1PR5Q9H228 398 aa29.12■■■□□ 2.25
RNF220-216ENST00000488865 TPCN1Q9ULQ1 816 aa29.12■■■□□ 2.25
RNF220-216ENST00000488865 PIN4Q9Y237 131 aaKnown RBP29.12■■■□□ 2.25
RNF220-216ENST00000488865 HOXB8P17481 243 aaPredicted RBP29.11■■■□□ 2.25
RNF220-216ENST00000488865 TECP42680 631 aa29.11■■■□□ 2.25
RNF220-216ENST00000488865 SMC1AQ14683 1233 aaKnown RBP29.11■■■□□ 2.25
RNF220-216ENST00000488865 MRPL43Q8N983 215 aaKnown RBP29.11■■■□□ 2.25
RNF220-216ENST00000488865 SLC7A3Q8WY07 619 aa29.11■■■□□ 2.25
RNF220-216ENST00000488865 MFSD14AQ96MC6 490 aa29.11■■■□□ 2.25
RNF220-216ENST00000488865 CCNT1O60563 726 aaKnown RBP29.1■■■□□ 2.25
RNF220-216ENST00000488865 ZNF623O75123 536 aa29.1■■■□□ 2.25
RNF220-216ENST00000488865 RAB27AP51159 221 aa29.1■■■□□ 2.25
RNF220-216ENST00000488865 BCAR1P56945 870 aa29.1■■■□□ 2.25
RNF220-216ENST00000488865 PIK3AP1Q6ZUJ8 805 aa29.1■■■□□ 2.25
RNF220-216ENST00000488865 CATSPER4Q7RTX7 472 aa29.1■■■□□ 2.25
RNF220-216ENST00000488865 KSR1Q8IVT5 923 aa29.1■■■□□ 2.25
RNF220-216ENST00000488865 NLRP4Q96MN2 994 aa29.1■■■□□ 2.25
RNF220-216ENST00000488865 FAM105AQ9NUU6 356 aa29.1■■■□□ 2.25
RNF220-216ENST00000488865 NPEPPSP55786 919 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 ANAPC15P60006 121 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 BMS1Q14692 1282 aaKnown RBP29.09■■■□□ 2.25
RNF220-216ENST00000488865 ANKRD1Q15327 319 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 EPHA7Q15375 998 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 SYCE2Q6PIF2 218 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 GLB1LQ6UWU2 654 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 WASF1Q92558 559 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 HAS1Q92839 578 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 CASP10Q92851 521 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 TMEM169Q96HH4 297 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 RPGRIP1Q96KN7 1286 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 CEP170P1Q96L14 293 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 DHX33Q9H6R0 707 aaKnown RBP29.09■■■□□ 2.25
RNF220-216ENST00000488865 IFT122Q9HBG6 1241 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 GJB4Q9NTQ9 266 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 COL4A3BPQ9Y5P4 624 aa29.09■■■□□ 2.25
RNF220-216ENST00000488865 C2orf71A6NGG8 1288 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms